PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu037157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 204aa MW: 22079.2 Da PI: 4.9955 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135 | 2.9e-42 | 48 | 147 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++hk+FGasn++kll++lpe +r da++s+vyeA+ar+rdPvyG++g i +lq+++++l+aela+++ Oeu037157.1 48 PCAACKILRRRCVDKCVLAPYFPPSEPLKFTIAHKVFGASNIIKLLQELPEAQRADAVNSMVYEANARLRDPVYGCAGSICQLQKKISELQAELAKAQ 145 7***********************************************************************************************99 PP DUF260 99 ee 100 +e Oeu037157.1 146 AE 147 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MECRETVTAT TVTSSAMMAA SSPSSLSPIS SPTGSFSSSP PPAIIVSPCA ACKILRRRCV 60 DKCVLAPYFP PSEPLKFTIA HKVFGASNII KLLQELPEAQ RADAVNSMVY EANARLRDPV 120 YGCAGSICQL QKKISELQAE LAKAQAEILN LQCQNANLVE FICQEMSQNQ ENCPQEQPND 180 SSPLFFDDWV WLGSPSGHEN LIK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 6e-51 | LBD family protein |