PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu036992.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 436aa MW: 48038.4 Da PI: 5.1201

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu036992.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.3	2e-05	5	45	6	40
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ ++e++ +C+++ +lC +C + H+ H+++ Oeu036992.1 5 CDFCGEQRSFVYCRSDAACLCLSCDRNVHSAnalsrrHQRT 45 *****************************657777778765 PP
2	zf-B_box	21.1	6.3e-07	47	87	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C++++++++ C++ ++ lC++C +H + H++ Oeu036992.1 47 LCERCNSQPAFVRCFEERTSLCQNCDWVGHPSsngspaHKR 87 7**************************99944566778876 PP
3	CCT	37.5	8.7e-14	392	421	15	44
CCT 15 RkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+FeKk+rY+sRK++A+ R R KGrFvk+ Oeu036992.1 392 RRFEKKVRYASRKVRADVRRREKGRFVKAG 421 9**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MGYLCDFCGE QRSFVYCRSD AACLCLSCDR NVHSANALSR RHQRTLLCER CNSQPAFVRC 60 FEERTSLCQN CDWVGHPSSN GSPAHKRQMV NCYSGCPSAT ELSSVWSFLL DSSQVENSTC 120 EQGMGSMSIS DNRPRDCEGP EGKNDTQNAP IGVEASDYSN MAVDKSNVRM KSETPLLDPK 180 LNDAERLVKS TSANPKVFFS GTEGTGLFGD DEFCDDFIMD EIDINIENYE EICGVNLNNQ 240 EQLFDDDEIN GIFGMRDMSG ANFNCPGAYA AEESSAVGTN VAQPTCSNAA SADSNISCRT 300 DPNLCFTRQF SGLNGESSAG DYHDCGPSSM LIMGEPPWCS PGPESSTPSS IRNVAVMRYK 360 EKKKTRNKVG HANTPPHCLV PVLESWGILP GRRFEKKVRY ASRKVRADVR RREKGRFVKA 420 GEAYDYDPLS KTRSY*

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MGYLCDFCGE QRSFVYCRSD AACLCLSCDR NVHSANALSR RHQRTLLCER CNSQPAFVRC  60
FEERTSLCQN CDWVGHPSSN GSPAHKRQMV NCYSGCPSAT ELSSVWSFLL DSSQVENSTC  120
EQGMGSMSIS DNRPRDCEGP EGKNDTQNAP IGVEASDYSN MAVDKSNVRM KSETPLLDPK  180
LNDAERLVKS TSANPKVFFS GTEGTGLFGD DEFCDDFIMD EIDINIENYE EICGVNLNNQ  240
EQLFDDDEIN GIFGMRDMSG ANFNCPGAYA AEESSAVGTN VAQPTCSNAA SADSNISCRT  300
DPNLCFTRQF SGLNGESSAG DYHDCGPSSM LIMGEPPWCS PGPESSTPSS IRNVAVMRYK  360
EKKKTRNKVG HANTPPHCLV PVLESWGILP GRRFEKKVRY ASRKVRADVR RREKGRFVKA  420
GEAYDYDPLS KTRSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-113	CO-like family protein