PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu036356.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 363aa    MW: 40425.6 Da    PI: 7.8513
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu036356.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-06126146526
                  --SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                   C++f++ G C  Gd+C +aHg
  Oeu036356.1 126 ACPDFRK-GVCGKGDSCEYAHG 146
                  7******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MMIGDTTKSN PTIQIPAWDY HFLDDPMAHI HSTGPDVSYY ESALSALQRF LPGRKDDDVL  60
QGENGGSDDF DIPVDAFSCD DFRMFDFKVK KCTRARSHDW TECPFAHPGE KARRRDPRKY  120
HYSGTACPDF RKGVCGKGDS CEYAHGVFEC WLHPARYRTQ PCKDGTNCRR RVCFFAHTPG  180
QLRLLTPEGS PRHLGCDSSV RLGQDPFMNA GVYGLYSPPS SPTTGSPPVS PSRNSVFGLV  240
ESMRGLQINK ARMGMSPSLS MSPPSWGLKM GSVFGSPRSP STLRPLFTSL PTTPIRAPTR  300
SGLTAFDIWE TCSEEEPVME RVESGRKLRE KIYEKLSKEN SLDRVESGIP GSYFGWVSEL  360
LQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-103C3H family protein