PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu036356.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C3H | ||||||||
Protein Properties | Length: 363aa MW: 40425.6 Da PI: 7.8513 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.9 | 1.3e-06 | 126 | 146 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C++f++ G C Gd+C +aHg Oeu036356.1 126 ACPDFRK-GVCGKGDSCEYAHG 146 7******.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MMIGDTTKSN PTIQIPAWDY HFLDDPMAHI HSTGPDVSYY ESALSALQRF LPGRKDDDVL 60 QGENGGSDDF DIPVDAFSCD DFRMFDFKVK KCTRARSHDW TECPFAHPGE KARRRDPRKY 120 HYSGTACPDF RKGVCGKGDS CEYAHGVFEC WLHPARYRTQ PCKDGTNCRR RVCFFAHTPG 180 QLRLLTPEGS PRHLGCDSSV RLGQDPFMNA GVYGLYSPPS SPTTGSPPVS PSRNSVFGLV 240 ESMRGLQINK ARMGMSPSLS MSPPSWGLKM GSVFGSPRSP STLRPLFTSL PTTPIRAPTR 300 SGLTAFDIWE TCSEEEPVME RVESGRKLRE KIYEKLSKEN SLDRVESGIP GSYFGWVSEL 360 LQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29190.1 | 1e-103 | C3H family protein |