PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu036236.4
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 385aa    MW: 42733.7 Da    PI: 7.2146
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu036236.4genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.57.3e-06133153526
                  --SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                   C+ f++ G C+ Gd C FaHg
  Oeu036236.4 133 ACPEFRK-GNCRKGDGCEFAHG 153
                  7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MMIGEMNRPS PTVHVPPWSL TLENPTFSLS PKANGNGGVD DYSVFFQNDS LSALKPYLQS  60
CASEFTADLL EMENWKGDFP VDAHSCDNFR MFEFKVRKCA RGRSHDWTEC PYAHPGEKAR  120
RRDPRKFHYS GTACPEFRKG NCRKGDGCEF AHGVFECWLH PARYRTQPCK DGMNCKRRVC  180
FFAHSPDQLR ALSPQGESYD GGSPHRLAFM SSSDSGSPTT ESPPMSPMTN SANQLSRSPG  240
SGSINEMVAS LRKLQLNQVK SMPSPLNRQV GSSSGLGSLS FPMSRPGYCS LPTTPTQAVS  300
RSGIGYFDSW DENDVSEEPI MERVESGRDL RAKMFEKLSK ENPLDRDAKN PNPNWSDAPN  360
PDVEWISELV VHINLSNSAG SVRN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-113C3H family protein