PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu036013.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 320aa    MW: 36548.8 Da    PI: 4.9019
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu036013.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.17.5e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l+++++++G g+W+++++  g+ R++k+c++rw +yl
      Oeu036013.1 15 KGLWSPEEDEKLYNYITRFGIGCWSSVPKLAGLQRCGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding46.87.1e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +++eE++l+v +++ lG++ W+ Ia+ ++ gRt++++k+ w++yl
      Oeu036013.1  68 RGMFSQEEEDLIVTLHEFLGNR-WAQIAAQLP-GRTDNDIKNLWNSYL 113
                      788*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRHSCCVKH NKLKKGLWSP EEDEKLYNYI TRFGIGCWSS VPKLAGLQRC GKSCRLRWIN  60
YLRPDLKRGM FSQEEEDLIV TLHEFLGNRW AQIAAQLPGR TDNDIKNLWN SYLKKKLIKQ  120
GLDPNTHKPM DETEENCTEK CSLQILEPDG ITYSSISDAM RQIFEEQTDI SRENFVNTQV  180
YEYDPLFLSE FQAKVDPNGY HPSFLITRDQ NQMEGNTNQN QGSGCDSFSS LMNFDHGNIM  240
DTGFSNSSTS PSRINSFLMN KAIESSSNSS YMNSHAGFDQ MNNLIENEAA YSWDAESKLD  300
SIFQFQFSGI ETEEIKPIP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G57560.15e-75MYB family protein