PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035998.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 432aa MW: 48940.8 Da PI: 6.153

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035998.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2e-16	196	242	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+++G + W+ Ia+++ gR +kqc++rw+++l Oeu035998.1 196 KGQWTGEEDRLLIHLVEKFGVRKWSHIAQMLK-GRIGKQCRERWHNHL 242 799**************************9.***********97 PP
2	Myb_DNA-binding	61.6	1.6e-19	248	290	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ WT+eEd +l+da+++lG++ W+ Ia++++ gRt++++k++w+ Oeu035998.1 248 KDVWTEEEDRILIDAHAELGNK-WAEIAKRLP-GRTENSIKNHWN 290 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MESKCGNDHA TPRPIALFNS NMKLKLEEDS SMHMNFSSKG HLQESQYFDL FSLTGSSFNP 60 NLGSQVNGFD PFDLFTLVSP STDFDSYDFK PFEDNDVGIM HNFQGGGFLN FQERKYPSTG 120 IETSDRNILS LNCHDSDLLN FVPDESSCVT AGNGNKNGFS NKWKNNSGDS SNTIIEDESA 180 SAKSSGRAWK KSKSAKGQWT GEEDRLLIHL VEKFGVRKWS HIAQMLKGRI GKQCRERWHN 240 HLRPDIKKDV WTEEEDRILI DAHAELGNKW AEIAKRLPGR TENSIKNHWN ATKRRQFSRR 300 KCRTKWPRPS SLLQNYIKSL NSEKGLASSP TATNVGIIYN ANASMKKLEK PDFMDLCVPD 360 YDFGEVPEFT LDDKLFEGSS IDSFMEDISG VSPKIDEKCF DTGLPFDVPP FMQFEGKKEF 420 DLMEMISQVN V*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MESKCGNDHA TPRPIALFNS NMKLKLEEDS SMHMNFSSKG HLQESQYFDL FSLTGSSFNP  60
NLGSQVNGFD PFDLFTLVSP STDFDSYDFK PFEDNDVGIM HNFQGGGFLN FQERKYPSTG  120
IETSDRNILS LNCHDSDLLN FVPDESSCVT AGNGNKNGFS NKWKNNSGDS SNTIIEDESA  180
SAKSSGRAWK KSKSAKGQWT GEEDRLLIHL VEKFGVRKWS HIAQMLKGRI GKQCRERWHN  240
HLRPDIKKDV WTEEEDRILI DAHAELGNKW AEIAKRLPGR TENSIKNHWN ATKRRQFSRR  300
KCRTKWPRPS SLLQNYIKSL NSEKGLASSP TATNVGIIYN ANASMKKLEK PDFMDLCVPD  360
YDFGEVPEFT LDDKLFEGSS IDSFMEDISG VSPKIDEKCF DTGLPFDVPP FMQFEGKKEF  420
DLMEMISQVN V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-82	MYB family protein