PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu035938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 387aa MW: 41916.5 Da PI: 6.3532 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.2 | 1.9e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +v+++G g+W++ +++ g+ R++k+c++rw +yl Oeu035938.1 14 KGPWTPEEDQKLLAYVEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.6e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l Oeu035938.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MGRSPCCDKV GLKKGPWTPE EDQKLLAYVE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG 120 IDPVTHKPKN DALKLSDGQS KNAANLSHMA QWESARLEAE ARLVRQSKLR SSEFSPSTSS 180 PMNKPVGLPG PARCLDILKA WNGGGAMVGL GCELESPTST LSYSENAPPM STTGIGENST 240 AFVDFVGNSS GSSETGIMKE EGEEDWKGFG NSTNLPEYRD GIANSVSFTS GIHDISLPVE 300 NAWESESLRV NSEHIPSGNF VQRFTDLLLS TAGADHSFSG DDCSLSGDGG GESDNGGGPS 360 GSGNDKNYWN SILNLVNSSN SDSPMF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 1e-113 | MYB family protein |