PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035897.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WRKY

Protein Properties

Length: 530aa MW: 57263.9 Da PI: 6.734

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035897.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.5e-30	276	334	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Oeu035897.1 276 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILTTTYEGTHNHP 334 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MDKGWCLTLE NSDPVGFFTS KSDFGFDLSS RLYDKEGTAT MFLTGREEQY ASSPADERRV 60 VLGEVDFFSD KNRPVKDMSV KKEDLHTARE SDVNTGLQLV INTGSDQSTV DDGISSDVED 120 KRAKNELAKL KVELEGMNAE NQRLRGMLSQ VSSNYTALQM HLVGLMQQQK NSTAHDSTQE 180 HEKKQENGGA TVPRQFLDLG LASEIDDPSN SSSEEKTTSG SPHKKIGRAE SPESDSCGPN 240 KIPKLNPSNP VDQSTEATMK KARVSVRARS EAPMISDGCQ WRKYGQKMAK GNPCPRAYYR 300 CTMAVGCPVR KQVQRCAEDR TILTTTYEGT HNHPLPPAAM ALASTTSAAA SMLLSGSMPS 360 PDGLINPNFL ARTLLPYSSN MATISASAPF PTVTLDLTHS PNPLQCQRVP PTQYQVPFLV 420 HPQNFASVTN PQMPQVFGQA LVNQSKFSGL QSSQNNIEQI QPPLHHQSFT NTLSAATAAI 480 TADPNFSAAL AAAITSIMGG SRPDSGNATN NTTNVNTSTS NKSSSFMGN*

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MDKGWCLTLE NSDPVGFFTS KSDFGFDLSS RLYDKEGTAT MFLTGREEQY ASSPADERRV  60
VLGEVDFFSD KNRPVKDMSV KKEDLHTARE SDVNTGLQLV INTGSDQSTV DDGISSDVED  120
KRAKNELAKL KVELEGMNAE NQRLRGMLSQ VSSNYTALQM HLVGLMQQQK NSTAHDSTQE  180
HEKKQENGGA TVPRQFLDLG LASEIDDPSN SSSEEKTTSG SPHKKIGRAE SPESDSCGPN  240
KIPKLNPSNP VDQSTEATMK KARVSVRARS EAPMISDGCQ WRKYGQKMAK GNPCPRAYYR  300
CTMAVGCPVR KQVQRCAEDR TILTTTYEGT HNHPLPPAAM ALASTTSAAA SMLLSGSMPS  360
PDGLINPNFL ARTLLPYSSN MATISASAPF PTVTLDLTHS PNPLQCQRVP PTQYQVPFLV  420
HPQNFASVTN PQMPQVFGQA LVNQSKFSGL QSSQNNIEQI QPPLHHQSFT NTLSAATAAI  480
TADPNFSAAL AAAITSIMGG SRPDSGNATN NTTNVNTSTS NKSSSFMGN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-139	WRKY family protein