PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu034837.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 193aa MW: 21899 Da PI: 10.3179 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.9 | 4.1e-06 | 79 | 101 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu034837.1 79 FVCEICNKGFQRDQNLQLHRRGH 101 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.5 | 0.00022 | 155 | 177 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ + H +t+ Oeu034837.1 155 WKCEKCSKIYAVQSDWRAHSKTC 177 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MFPSVMSNST NSKSEEASIS SGPRVHDYGS LKSVLQKTHS IIPNQPQKIK KKRSLPGNPD 60 PDAEVIALSP NTLLATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR SSTDNRKRAY 120 VCPEPTCVHH HPSRALGDLT GIKKHYCRKH GEKKWKCEKC SKIYAVQSDW RAHSKTCGTR 180 EYRCDCGTIF SR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 4e-94 | C2H2 family protein |