PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034699.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 375aa MW: 42183.6 Da PI: 9.3953

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034699.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	31	6.3e-10	69	125	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV +++++gr++A+++d + ++ k + g ++ +e+Aa+ ++ a++k++g Oeu034699.1 69 SIYRGVKRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARSYDLAALKYWG 125 57*****************4444.2455535555.779999************98 PP
2	AP2	46.8	7.3e-15	168	219	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+Ir + e +k +lg+f t eeAa+a++ a k++g Oeu034699.1 168 SIYRGVTRHHQHGRWQARIRSVAE---SKDLYLGTFSTQEEAAEAYDIAVIKFRG 219 57*****************744...4********************99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MTSTTVQTLS LSMRTGSQSS TRLPVTTVNG ESSTFDNDEQ QLKNAPDSQT GATEAAPRKS 60 IDTFGQRTSI YRGVKRHRWT GRYEAHLWDN SCRREGQTRK GRQGGYDKEE KAARSYDLAA 120 LKYWGTSTTT NFPMSNYEKE IEEMKHMTRQ EYVASLRRKS SGFSRGASIY RGVTRHHQHG 180 RWQARIRSVA ESKDLYLGTF STQEEAAEAY DIAVIKFRGL NAVTNFEINR YDVKSILESS 240 TLPIGAIAFQ QAQPLSMHKS YPYRHLRRDT DVNQSFRDLH QLQLGNAQNF LQHSGLHNLM 300 SLDSSSIEHS SGSNSIIYSN NAAGDRNGTK GNFFVPMGTA LAQDEVKPHD YENMFGLGSG 360 DPYLQERNSE NIGF*

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MTSTTVQTLS LSMRTGSQSS TRLPVTTVNG ESSTFDNDEQ QLKNAPDSQT GATEAAPRKS  60
IDTFGQRTSI YRGVKRHRWT GRYEAHLWDN SCRREGQTRK GRQGGYDKEE KAARSYDLAA  120
LKYWGTSTTT NFPMSNYEKE IEEMKHMTRQ EYVASLRRKS SGFSRGASIY RGVTRHHQHG  180
RWQARIRSVA ESKDLYLGTF STQEEAAEAY DIAVIKFRGL NAVTNFEINR YDVKSILESS  240
TLPIGAIAFQ QAQPLSMHKS YPYRHLRRDT DVNQSFRDLH QLQLGNAQNF LQHSGLHNLM  300
SLDSSSIEHS SGSNSIIYSN NAAGDRNGTK GNFFVPMGTA LAQDEVKPHD YENMFGLGSG  360
DPYLQERNSE NIGF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-125	AP2 family protein