PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034344.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 497aa MW: 55281.3 Da PI: 7.8681

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034344.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.5	2.6e-16	217	276	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Oeu034344.1 217 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 276 78*****************988886678446***********************98 PP
2	AP2	46.5	8.8e-15	319	370	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Oeu034344.1 319 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 370 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MEASSDHHQT QSCSNTVSNS IPSSFSSSFN YPGIYYGENT GFYSPLTVMP LKSDGSLCII 60 EGNRTQPQGI VTSTPKVADF FGGATMGTHH YEGCDRGCMA LSLDSMYYHQ TPDNQANNGQ 120 DFLNSFQENS RQQQIHKMGI CLDDNGGESG PNCVMGYGDL QSLSLSMSPG TQSSCITGSQ 180 HIAPAIGLEN KKRDSEKVAQ KQIVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC 240 KKEGQSRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH INFPLENYHQ ELEEMKNMTR 300 QEYVAHLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA 360 YDVAAIKFRG VNAVTNFDIS RYDVERIMAS STLLSGEMAK RNKDMDSSNK IPYSNPNHDH 420 HLEVANASKE DTSNLPDWKM ALYQKPDKSS GLPLHISMPP PASNFFTSST SSVNSWISTA 480 QMKSQVPLFA AWTDAS*

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MEASSDHHQT QSCSNTVSNS IPSSFSSSFN YPGIYYGENT GFYSPLTVMP LKSDGSLCII  60
EGNRTQPQGI VTSTPKVADF FGGATMGTHH YEGCDRGCMA LSLDSMYYHQ TPDNQANNGQ  120
DFLNSFQENS RQQQIHKMGI CLDDNGGESG PNCVMGYGDL QSLSLSMSPG TQSSCITGSQ  180
HIAPAIGLEN KKRDSEKVAQ KQIVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC  240
KKEGQSRKGR QVYLGGYDME EKAARAYDLA ALKYWGPSTH INFPLENYHQ ELEEMKNMTR  300
QEYVAHLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA  360
YDVAAIKFRG VNAVTNFDIS RYDVERIMAS STLLSGEMAK RNKDMDSSNK IPYSNPNHDH  420
HLEVANASKE DTSNLPDWKM ALYQKPDKSS GLPLHISMPP PASNFFTSST SSVNSWISTA  480
QMKSQVPLFA AWTDAS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-171	AP2 family protein