PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034129.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 462aa    MW: 50216.1 Da    PI: 7.6945
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034129.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP119.63.8e-37802332135
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec.eaesssssasnsssg.. 88 
                   g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG d++sk++eWLl +a  +i +l++         +        ++e++sss +n+++g  
  Oeu034129.1  80 SGGKDRHSKVLTSKGLRDRRVRLSVNTAIQFYDLQDRLGCDQPSKAVEWLLMAAASSIEKLPSIstafpdtpK------QpSDEKRSSSCGNDQHGfd 171
                  689***********************************************************99665543321......1233444444444444455 PP

          TCP  89 ..............kaaksaakskksqksaasalnlak.esrakarararertrekmriknk 135
                                +  + a   +ks +s+ s l+l++ e r kar+ra+er +ek + k++
  Oeu034129.1 172 sdevdmdcdgggggNPPEMASMLSKSGSSKGSGLSLSRsENRIKARERAKERVAEKEKEKEN 233
                  777888899999965555555888888888888****99****************9998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MEADDIQNHG CKYPRISNGN RRIESTKIGQ KGDDSQYPDE EDGETRRGRA NGSGGVGSGI  60
DLGRFNGWPS SRIVRVSRAS GGKDRHSKVL TSKGLRDRRV RLSVNTAIQF YDLQDRLGCD  120
QPSKAVEWLL MAAASSIEKL PSISTAFPDT PKQPSDEKRS SSCGNDQHGF DSDEVDMDCD  180
GGGGGNPPEM ASMLSKSGSS KGSGLSLSRS ENRIKARERA KERVAEKEKE KENESPHVEH  240
LNPLSHTTSF TELLNVGMNN ANNNTNLNAS VHQNTTSNES NYFQKSPRQW SSTPMDYFTS  300
GLLGPLATRP GQIHSGDPLS QRACSPLFTV SGVHEPELQH ISFVPEPFVS AITVHNNNNH  360
NGADEYNLKH NLNFTISSSA ASSSLAGFNR GTLQSNSSSP SLLPHLQRFP PIDGSPNFFI  420
GTTNAPVENY HQFLSGFDAR LQLCYGDGGT GRHSQKGKRK N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30210.23e-37TCP family protein