PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033854.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 1540aa MW: 169295 Da PI: 6.5761

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033854.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.5e-08	628	670	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W+ eE e ++d + +G++ +++Ia+ + ++t +c+++++k + Oeu033854.1 628 WSSEEREVFIDKLATFGKD-FSKIASFLD-HKTTADCVEFYYKNR 670 ***************99.*****.**********975 PP
2	Myb_DNA-binding	37.1	7.3e-12	842	883	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE ++++av +G++ +++I+r++ +R++ qck ++ k Oeu033854.1 842 NWTDEEKSIFIQAVSSYGKD-FAKISRCVR-TRSRDQCKVYFSK 883 8***************99.*****.******99866 PP

Sequence ? help Back to Top
Protein Sequence Length: 1540 aa Download sequence
MYPEESARGV PPLGSRFNER SFDDENSRPF LSRGDGRYFR NSRESRGSSS QKDWKVNSLE 60 PPKSPRGLGK LDNEVNDQRS VGNVQTCNNN DNHNKNNSHP DPNFEKSPDQ SQLKYHLDES 120 GSDADGLGRT VQKVEIENSL GSIDWKPVKW TRSESLSSRG SGFSDSSSSK SMGADSNEMK 180 AEMQPKNVMA VQSPSGEAVA CVKSNVPTPA PSEETSSRKK PRLGWGEGLA KYEKKNVDGP 240 EDGATQNGLV ISENKREPAH TLSANVADRS PRVAVFLDDT SPATPSSVGC SSLPGTEENR 300 SVKVASVDHD VSNLSCSRSI LSHNPCQGPA FNLENLEPES VANLSSYINE LLQSDDSSSM 360 DAGFVQSTAM KKLMVWKVDI LKAVEMTESE IDSLETELKS SISKSRGSAT SKFVELPSSG 420 QDVFPLDTAN PIDGFLNGEE IYNLIMASNK DSASRASEVL NKLLPANRYH STASYLQCDP 480 MIVKKKIIMR RRFLHFKEKV ITLRFRVFRH FWKDDRLLAS MKILAKSSKK LDQRFRFMRN 540 SSQKYLPSDI PQFLYPVGIF NVVPEAEVSD YVSRLLSDAQ VKLCRNTLKM PALILDDKEK 600 MISKFISSNC LVEDPCAVEK ERSMINLWSS EEREVFIDKL ATFGKDFSKI ASFLDHKTTA 660 DCVEFYYKNR KSDCFEKARN RPDVAKPKKS RSTNTYLVAS GKRWNREVNA ASLDIVGSTA 720 SVANAVDGIE IQQNRTSRYF FSGSYKALRI DDGSLEQWTG LDVYNNDRET VAADVLAGIC 780 GSLSSEATGS CITSSVDLGE GYHDWRYHRV GSSTRQSLAA EVTQNVDGER SDDSCEEMDS 840 TNWTDEEKSI FIQAVSSYGK DFAKISRCVR TRSRDQCKVY FSKARKCLGL DLIHPSTGDV 900 VSGDVNGGGS DAEGACVVGT GSVISSEKSR SKMEDDLLLS CESDLVGTMN SNPNVNKYEN 960 SHGIALQVST GTERVLNNSV PTDCQVNKKP GLDFDVSCEE PNGVNSGSAA AVEHKNVFVS 1020 SEEVAEQVIE EADHNALPNR LSNEAVLFEV PNGHPGPGNE GRGLRLPECR LNEKKVANGH 1080 ATSGETNSLS CSKRVMNYEP QPSAIPSHPS ADIPSSSQVN ILSGCQKKAG LESSSADKSH 1140 TIMWQHRDCL APTSSLLRFS APTKVISSAI GDVGNKDDQG QDIVLIGDCH RPSGHSLLDH 1200 IVSSHVLCGY PSSDSTIKER NSNMSCKRPI LLRSAPKSDG NFHPDRHSEF YFQKCNSSRN 1260 HSSDAEASLP SREQTKDHYR PQSGSSTDME KPCGNGDVKL FGKILTSSEL KPISSVHKSE 1320 DDKTQHHKAG NQSFNMKLSA DRSTDFNSDQ LPFEHDNCLG SEHVPVRNFG FCDGNKMQNG 1380 FPHLPYSTLL LTKYPDAFSN CAMPSAKLER GVRCNGHNLN GISCLPNREP SSSNGVADYQ 1440 VLRSQEVEHF SIDMRREQEL YAEMQRRNRF DVISGIQQQG RGMVGINLVG RGGVLVGGQT 1500 SGVSDPVAVI KMQYAKKQFG AQNIIIEDDS WRSKGDVGR*

Sequence ? help Back to Top

Protein Sequence Length: 1540 aa Download sequence

MYPEESARGV PPLGSRFNER SFDDENSRPF LSRGDGRYFR NSRESRGSSS QKDWKVNSLE  60
PPKSPRGLGK LDNEVNDQRS VGNVQTCNNN DNHNKNNSHP DPNFEKSPDQ SQLKYHLDES  120
GSDADGLGRT VQKVEIENSL GSIDWKPVKW TRSESLSSRG SGFSDSSSSK SMGADSNEMK  180
AEMQPKNVMA VQSPSGEAVA CVKSNVPTPA PSEETSSRKK PRLGWGEGLA KYEKKNVDGP  240
EDGATQNGLV ISENKREPAH TLSANVADRS PRVAVFLDDT SPATPSSVGC SSLPGTEENR  300
SVKVASVDHD VSNLSCSRSI LSHNPCQGPA FNLENLEPES VANLSSYINE LLQSDDSSSM  360
DAGFVQSTAM KKLMVWKVDI LKAVEMTESE IDSLETELKS SISKSRGSAT SKFVELPSSG  420
QDVFPLDTAN PIDGFLNGEE IYNLIMASNK DSASRASEVL NKLLPANRYH STASYLQCDP  480
MIVKKKIIMR RRFLHFKEKV ITLRFRVFRH FWKDDRLLAS MKILAKSSKK LDQRFRFMRN  540
SSQKYLPSDI PQFLYPVGIF NVVPEAEVSD YVSRLLSDAQ VKLCRNTLKM PALILDDKEK  600
MISKFISSNC LVEDPCAVEK ERSMINLWSS EEREVFIDKL ATFGKDFSKI ASFLDHKTTA  660
DCVEFYYKNR KSDCFEKARN RPDVAKPKKS RSTNTYLVAS GKRWNREVNA ASLDIVGSTA  720
SVANAVDGIE IQQNRTSRYF FSGSYKALRI DDGSLEQWTG LDVYNNDRET VAADVLAGIC  780
GSLSSEATGS CITSSVDLGE GYHDWRYHRV GSSTRQSLAA EVTQNVDGER SDDSCEEMDS  840
TNWTDEEKSI FIQAVSSYGK DFAKISRCVR TRSRDQCKVY FSKARKCLGL DLIHPSTGDV  900
VSGDVNGGGS DAEGACVVGT GSVISSEKSR SKMEDDLLLS CESDLVGTMN SNPNVNKYEN  960
SHGIALQVST GTERVLNNSV PTDCQVNKKP GLDFDVSCEE PNGVNSGSAA AVEHKNVFVS  1020
SEEVAEQVIE EADHNALPNR LSNEAVLFEV PNGHPGPGNE GRGLRLPECR LNEKKVANGH  1080
ATSGETNSLS CSKRVMNYEP QPSAIPSHPS ADIPSSSQVN ILSGCQKKAG LESSSADKSH  1140
TIMWQHRDCL APTSSLLRFS APTKVISSAI GDVGNKDDQG QDIVLIGDCH RPSGHSLLDH  1200
IVSSHVLCGY PSSDSTIKER NSNMSCKRPI LLRSAPKSDG NFHPDRHSEF YFQKCNSSRN  1260
HSSDAEASLP SREQTKDHYR PQSGSSTDME KPCGNGDVKL FGKILTSSEL KPISSVHKSE  1320
DDKTQHHKAG NQSFNMKLSA DRSTDFNSDQ LPFEHDNCLG SEHVPVRNFG FCDGNKMQNG  1380
FPHLPYSTLL LTKYPDAFSN CAMPSAKLER GVRCNGHNLN GISCLPNREP SSSNGVADYQ  1440
VLRSQEVEHF SIDMRREQEL YAEMQRRNRF DVISGIQQQG RGMVGINLVG RGGVLVGGQT  1500
SGVSDPVAVI KMQYAKKQFG AQNIIIEDDS WRSKGDVGR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	2e-83	MYB family protein