PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033828.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 370aa MW: 43413.4 Da PI: 7.7674

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033828.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.5	4e-14	3	49	39	87
trihelix 39 rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea Oeu033828.1 3 EEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 49 69***************************98..55667*****85 PP
2	trihelix	50.8	4.4e-16	242	320	2	83
trihelix 2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 W+++e+ L ++r meer+++ + ++ Wee++ km+ g rs +Ckekw+++n++ ++++ ++++ + c+y++ Oeu033828.1 242 WPDREITRLFQLRAGMEERFQQrRVSEDVIWEEIATKMACFGHDRSGLTCKEKWDSVNNYLLECNNKRREN----PKGCSYYQ 320 *******************72569999**********************************999984....44588876 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MSEEHGYQRS GKKCREKFEN LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGETNNGVVA 60 LETHVVGSSF GYKTPNAVPN HETYPAPRIS DYSLSLSNSS DFDTTSSDDS DLHEGIDDNL 120 TNKRKKSRGK RCWKAKIRDF IDAQMRKMMD KQEAWMEKMM ITIEHKEQER ILREREWRKQ 180 DAERIEREQK FWANERAWIE GRDASLMEAL QKLNGKELMV AAEIQSLSAN PNNDTVKGDH 240 IWPDREITRL FQLRAGMEER FQQRRVSEDV IWEEIATKMA CFGHDRSGLT CKEKWDSVNN 300 YLLECNNKRR ENPKGCSYYQ NNNESICNER DADHTSRSND NGMNDFCFRY FMGDAGNTWE 360 NYALKLNKG*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MSEEHGYQRS GKKCREKFEN LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGETNNGVVA  60
LETHVVGSSF GYKTPNAVPN HETYPAPRIS DYSLSLSNSS DFDTTSSDDS DLHEGIDDNL  120
TNKRKKSRGK RCWKAKIRDF IDAQMRKMMD KQEAWMEKMM ITIEHKEQER ILREREWRKQ  180
DAERIEREQK FWANERAWIE GRDASLMEAL QKLNGKELMV AAEIQSLSAN PNNDTVKGDH  240
IWPDREITRL FQLRAGMEER FQQRRVSEDV IWEEIATKMA CFGHDRSGLT CKEKWDSVNN  300
YLLECNNKRR ENPKGCSYYQ NNNESICNER DADHTSRSND NGMNDFCFRY FMGDAGNTWE  360
NYALKLNKG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	5e-85	Trihelix family protein