PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033596.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 106aa    MW: 11739.6 Da    PI: 7.2441
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033596.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26024.86e-08588298
       DUF260  2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98
                 C++ +vl ++C+ dC+ +                ++G+  +++l++  + + r+   + l+y+A+ r+  P+y +vg+i+++++q + +  e++l +
  Oeu033596.1  5 CNGFRVLHKGCSGDCTDSTL------------FLVYGRPGLINLINFNHVNLRPP-QEVLLYKACERIISPIYESVGLIWSGNSQRCLATIEAVLKG 88
                 77777777777777766555............479**********9988877765.588***************************99999988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MRMSCNGFRV LHKGCSGDCT DSTLFLVYGR PGLINLINFN HVNLRPPQEV LLYKACERII  60
SPIYESVGLI WSGNSQRCLA TIEAVLKGSS LMQVYDTDES NVLEK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.11e-28LBD family protein