PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033189.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 398aa MW: 43026.7 Da PI: 9.1857

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033189.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	75.5	8.4e-24	76	128	1	53
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETT CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhels 53 +CqvegC++dls+ak y++rhkvC +hsk p v+v+gleqrfCqqCsr +l+ Oeu033189.2 76 RCQVEGCNVDLSDAKAYYSRHKVCGMHSKFPRVTVAGLEQRFCQQCSRSTHLT 128 6***********************************************88776 PP
2	SBP	48.5	2.3e-15	137	173	39	75
EEEE-TTTSSEEETTT--SS--S-STTTT-------S CS SBP 39 eqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrk 75 + rf s fh+l efD++krsCrrrLa+hnerrrk Oeu033189.2 137 SPRFSEGFSWFHQLPEFDQGKRSCRRRLAGHNERRRK 173 56999999****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MELGSASSSS SASGGSDSLN GLKFGKKIYF EDVGVGVQDK FGGGPPSLPP IAAGLPPPSP 60 AKKGRIGVGQ SGQPSRCQVE GCNVDLSDAK AYYSRHKVCG MHSKFPRVTV AGLEQRFCQQ 120 CSRSTHLTYY ANFLSTSPRF SEGFSWFHQL PEFDQGKRSC RRRLAGHNER RRKLPPGSLL 180 STRYGNLSSS IFENHGRTGG FVMDFATNPN LTGRDSWPNT MSSERVVGNQ VKITGKFARS 240 WQDNLQNPPP DLLQGLTTRV SYLGPGVSSE ECYSGVSDSS SALSLLSNQP WGSRNHSSSH 300 GENSSLDANG TPLVQPLVTH SAPIVNFSVF SHGFKGDHVS STLQEMPPNL GLGQISQPDN 360 SRYSNELEVA RQGGGQYHEL QQSRGFNSSV QHMNWPL*

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MELGSASSSS SASGGSDSLN GLKFGKKIYF EDVGVGVQDK FGGGPPSLPP IAAGLPPPSP  60
AKKGRIGVGQ SGQPSRCQVE GCNVDLSDAK AYYSRHKVCG MHSKFPRVTV AGLEQRFCQQ  120
CSRSTHLTYY ANFLSTSPRF SEGFSWFHQL PEFDQGKRSC RRRLAGHNER RRKLPPGSLL  180
STRYGNLSSS IFENHGRTGG FVMDFATNPN LTGRDSWPNT MSSERVVGNQ VKITGKFARS  240
WQDNLQNPPP DLLQGLTTRV SYLGPGVSSE ECYSGVSDSS SALSLLSNQP WGSRNHSSSH  300
GENSSLDANG TPLVQPLVTH SAPIVNFSVF SHGFKGDHVS STLQEMPPNL GLGQISQPDN  360
SRYSNELEVA RQGGGQYHEL QQSRGFNSSV QHMNWPL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-42	SBP family protein