PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033178.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 379aa    MW: 41563.9 Da    PI: 8.6837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033178.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12305350655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k  + a++L  Av+YIk+Lq
  Oeu033178.1 305 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDFAVDYIKNLQ 350
                  689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MYGDSHALSS DSGPIIPSNL RPKEQQLQQV LFMDSETNTN YSHQNISGLA RFRSAPSSLF  60
ANFNDGVETQ GLTSMFDCGG EKAAANEFSQ LPPQYPRQSG VHVDGGGYRV SGLTRMDHQG  120
QGKMGSSLTR QNSSPAELFS HHTAQNGYAT ARGIGSYRAS ANVDPSPSSS TFKNHMSFSS  180
LGMLSRITEV ENESGGASGL DDTKVGNSNY VNSSYGTGFP FGSWNDSTNF GENFNGIKRE  240
FDNDGKAFVN NENAEFGSRP HFLSHHISLP KTSAEMAAVE KFLQLQDTVP CKIRAKRGCA  300
THPRSIAERV RRTRISERMR KLQELVPNMD KQTNTADMLD FAVDYIKNLQ KQYKTLSDNR  360
ANCKCSASQK SVPNQTRH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-94bHLH family protein