PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032668.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 430aa MW: 47112.7 Da PI: 5.5094

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032668.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	7.1e-18	49	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd +l ++v ++G ++W+ Iar ++ gR++k+c++rw + Oeu032668.1 49 RGPWSPEEDAILSRLVSKFGARNWSMIARGIP-GRSGKSCRLRWCNQ 94 89****************************.*********985 PP
2	Myb_DNA-binding	53.5	5.7e-17	101	145	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +++ a++ +G++ W++Ia+ ++ gRt++ +k++w++ Oeu032668.1 101 RKPFTDEEDRIILAAHAIHGNK-WASIAKLLP-GRTDNGIKNHWNST 145 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MKEMEEKAEQ QPNELEQLID PAGHGLISVD DGGGEEREST VGGGMGRVRG PWSPEEDAIL 60 SRLVSKFGAR NWSMIARGIP GRSGKSCRLR WCNQLDPSVK RKPFTDEEDR IILAAHAIHG 120 NKWASIAKLL PGRTDNGIKN HWNSTLRRKC VNNGGLKPAS SEETLSGGNM KSFKSSERLD 180 MGMVANQPRQ FEDEVQATTN CCAPKQNISS DSVTIDPSAK ENHPMVYFSA EENRPVIYTS 240 VEENNPVISR PVAKVGAFNV YNPSLDSAFP RTIPMQGPLI QASKPDLGIC KFLEGASGET 300 IIPLHCGHGC CTHSSRNSSV RSLLGPEFLE YEEISPFPSQ ELSAIAMDLN NIAWIRSGLE 360 NAGRLSESAS HLRVSEGPST SMNSFEQNNE NDQFQFETPN SFTSVSKDVV SQQMRMPTFT 420 LRSEVEGLS*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MKEMEEKAEQ QPNELEQLID PAGHGLISVD DGGGEEREST VGGGMGRVRG PWSPEEDAIL  60
SRLVSKFGAR NWSMIARGIP GRSGKSCRLR WCNQLDPSVK RKPFTDEEDR IILAAHAIHG  120
NKWASIAKLL PGRTDNGIKN HWNSTLRRKC VNNGGLKPAS SEETLSGGNM KSFKSSERLD  180
MGMVANQPRQ FEDEVQATTN CCAPKQNISS DSVTIDPSAK ENHPMVYFSA EENRPVIYTS  240
VEENNPVISR PVAKVGAFNV YNPSLDSAFP RTIPMQGPLI QASKPDLGIC KFLEGASGET  300
IIPLHCGHGC CTHSSRNSSV RSLLGPEFLE YEEISPFPSQ ELSAIAMDLN NIAWIRSGLE  360
NAGRLSESAS HLRVSEGPST SMNSFEQNNE NDQFQFETPN SFTSVSKDVV SQQMRMPTFT  420
LRSEVEGLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	2e-99	MYB family protein