PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032521.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

M-type_MADS

Protein Properties

Length: 414aa MW: 45856.9 Da PI: 4.1934

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032521.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	28.7	1.7e-09	2	26	26	50
HHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 26 ELSvLCdaevaviifsstgklyeys 50 ELSvLCd++++ +i++++gk+ +++ Oeu032521.1 2 ELSVLCDVKACAVILGPDGKIETWP 26 9***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MELSVLCDVK ACAVILGPDG KIETWPENRS DVQDVIDLFK KDCLNNKKRK HNNNDHGCKK 60 KQVLGGDDGV VEDFLKKLEN KLDQVKKRIK EIKTKDQETG SEADYSFSHP ASELGNLLSG 120 GIPPNAWPPK SSQNLSSYFN AGMLGFGNQL PGNIVSSTPG YFGGFPNNVE GMHLGPVVSS 180 APMSQLGFQP EQYLPCSLRL QSSNAASFST TQSLHMPYSA GHTPYSTGFQ QNCIDNSDNS 240 FWIEPPIFQE TSSSNPTMEI PCYFDYKFDE IHGFEQARQI PLSFDQCDPG FELAGDEMSS 300 LNQTMETPCL FDYQVDEIHG FEQARQIPLS FDQYGTEFEL STTENDRSNT SVEWTENQIC 360 TTQPSPLSSC FSVTSMTLPE EDELDVLLEL QQNAPTLDCF NPDFGLMGTL GFP*

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MELSVLCDVK ACAVILGPDG KIETWPENRS DVQDVIDLFK KDCLNNKKRK HNNNDHGCKK  60
KQVLGGDDGV VEDFLKKLEN KLDQVKKRIK EIKTKDQETG SEADYSFSHP ASELGNLLSG  120
GIPPNAWPPK SSQNLSSYFN AGMLGFGNQL PGNIVSSTPG YFGGFPNNVE GMHLGPVVSS  180
APMSQLGFQP EQYLPCSLRL QSSNAASFST TQSLHMPYSA GHTPYSTGFQ QNCIDNSDNS  240
FWIEPPIFQE TSSSNPTMEI PCYFDYKFDE IHGFEQARQI PLSFDQCDPG FELAGDEMSS  300
LNQTMETPCL FDYQVDEIHG FEQARQIPLS FDQYGTEFEL STTENDRSNT SVEWTENQIC  360
TTQPSPLSSC FSVTSMTLPE EDELDVLLEL QQNAPTLDCF NPDFGLMGTL GFP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37415.1	1e-08	M-type_MADS family protein