PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032519.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 405aa    MW: 44988.1 Da    PI: 4.2771
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032519.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF26.68e-092262650
                 HHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF 26 ELSvLCdaevaviifsstgklyeys 50
                 ELSvLC+++++ +i++++gk+ +++
  Oeu032519.1  2 ELSVLCEVKACAVILGPDGKIETWP 26
                 9***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MELSVLCEVK ACAVILGPDG KIETWPENRS DVQDVIDLFK KDCLNNKKRK HNNNDHGCKK  60
KQVLGGDEGA VENFLKKVEN KLDQVKKRIK EIKTKDQETG SASEFGNPLS GGIPPNAWPP  120
KSSQNLSSYF NAGMLGFGNQ LPGNIMSSTP GYFGGFPSNV EGMHLGPVVS SEPMSQLGFQ  180
SEQYLPCSLQ LQSSNAASFY MTQSLHMPYS TGHTPYSMGF QQNCIDNSDN SFWTESLIFQ  240
ETSSSNPTME TPCCFDYKVD EIHGFEQARQ IPLSFDQCDP GFELAADEMS SLNQTMETPC  300
LFDYQVDEIH GFEKARHIPL SFDQYGTEFE LSTTENDRSN TRVEWTENQI CTTQPSPQSS  360
CFSVTSMTLP EEDELDVLLE LQQNAPTLDC FNPDFGLMGT LGFS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02235.12e-08M-type_MADS family protein