PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032145.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 399aa MW: 44888.8 Da PI: 8.5368

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032145.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.2	7e-06	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H Oeu032145.1 51 YVCEICSQGFQRDQNLQMHRRRH 73 9*********************9 PP
2	zf-C2H2	16.1	3.1e-05	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ Oeu032145.1 128 WVCEKCSKGYAVQSDYKAHLKTC 150 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MLRNCPSSSS QPFAADNGNF SKRKRRPAGT PDPDAEVVSL SPKTLLESDR YVCEICSQGF 60 QRDQNLQMHR RRHKVPWKLQ KSETPIVRKR VFVCPELTCL HHDPCHALGD LVGIKKHFRR 120 KHSNYKHWVC EKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDACSMGR 180 LRSESHALQS AACLSRTASG PSPSSDTNLS NVAPWPIFMA NVSETKNSEP TFLELQLLTK 240 PCEDQSTQLQ LSIGSSEVSE RNEIDIANIN RFSPRESDAG EKLPRVEEQI RIAMVEKAYA 300 EEARIQAKRQ SELAEHEFAN AKRIRQQAKA ELEKAQALKQ HAIMEVNSTI LQLTCQSCKD 360 KYQKGITEAS TPFVNPFGLS YISSALRETT DHLTFVQL*

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MLRNCPSSSS QPFAADNGNF SKRKRRPAGT PDPDAEVVSL SPKTLLESDR YVCEICSQGF  60
QRDQNLQMHR RRHKVPWKLQ KSETPIVRKR VFVCPELTCL HHDPCHALGD LVGIKKHFRR  120
KHSNYKHWVC EKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDACSMGR  180
LRSESHALQS AACLSRTASG PSPSSDTNLS NVAPWPIFMA NVSETKNSEP TFLELQLLTK  240
PCEDQSTQLQ LSIGSSEVSE RNEIDIANIN RFSPRESDAG EKLPRVEEQI RIAMVEKAYA  300
EEARIQAKRQ SELAEHEFAN AKRIRQQAKA ELEKAQALKQ HAIMEVNSTI LQLTCQSCKD  360
KYQKGITEAS TPFVNPFGLS YISSALRETT DHLTFVQL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	27	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-135	C2H2 family protein