PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031750.4
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 302aa    MW: 33887.8 Da    PI: 4.5723
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031750.4genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF54.21.8e-17955450
                 -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                 +n++  + tf kR+  i KK  ELSvLCd++v+ ii++++g++ +++
  Oeu031750.4  9 KNQRAIEKTFLKRKDCIKKKSMELSVLCDVKVCAIIVGPDGRVETWP 55
                 56666778**************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MENALPRNKN QRAIEKTFLK RKDCIKKKSM ELSVLCDVKV CAIIVGPDGR VETWPESHDD  60
VRQVIQAYKN CPVDKKKRER PQELDHGGSN KKQKVCAVSE GVKRTGFTDE DVLRSIDAKL  120
CEVRKRIELI KSNDQKRSFF QETASFGQSP IINNSICFDT QLEEIQGFEE NDLFDWCDVF  180
NAGSENPRDN QELFTAAPTP TSLNPCSGLT DTDQDFQSST PAVNSLTPGC ELMDTFSVTN  240
NGEFNQFAPT DLNSFISGSE SVNSFTLPSN QCFKPNRDWF EDSAFVADLI SWDAAPINIW  300
T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02235.13e-11M-type_MADS family protein