PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu031627.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 322aa MW: 36220.3 Da PI: 5.4742

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu031627.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl Oeu031627.1 14 KGPWSPEEDAKLKAYIEEYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.8	2.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Oeu031627.1 69 GGFSEEEDNIICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGKAPCCDKA NVKKGPWSPE EDAKLKAYIE EYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGR 120 RKNSRVNQLS AVSGQDPNDP NGGEENNYLK NLSSSALERL QLHIQLQNPF SFYNNPVFWP 180 KLNPLQDKMV QSQQFLNENN QNNLIQRTPI GPLQAAVEWS TISNLKADEH QNSENETNIQ 240 GSNFVGQSNY TGIEPLSGFT QAELDDLLNN EVADFQPTQS QNLAEFDCFK EMNGSMDSLG 300 WWSNDFVDAT SASSKSWDSS F*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-92	MYB family protein