PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031607.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 355aa    MW: 39533.4 Da    PI: 7.8972
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031607.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.11.1e-06132151626
                  -SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                  C++f + G C+ Gd+C +aHg
  Oeu031607.1 132 CPDFKK-GLCRKGDSCEYAHG 151
                  9*****.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MMMIRDPPRS NPTIQIPPAC DFRFVDDQMP TVHSPLNTFA ALQHYLQSKK DGDGMEGEVN  60
GVVIVEEDGI DDVDYDFPID AFSSDDFRMF EFKVKKCLRV RSHDWTECPF VHPGEKARRR  120
DPRKFQYSCA GCPDFKKGLC RKGDSCEYAH GVFETWLHPA RYRTQPCKDG THCRRRVCFF  180
AHTPDQLRAC SPSPDFSPSR FGHSPAYGHS PASSPANGSP PKSPRGSSRN SVSGLAESIR  240
GMQINKVRMG LSLSPPTWGL QIGSGFGSPR SPTRFLPGFS SLPSTPAWTR TRSGFKAFDI  300
SETGEEEEPV MESVESGRDL RAKIYAKLSK ENSLHRVDSS NTDTDVGWVS ELVK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.18e-82C3H family protein