PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu031351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 217aa MW: 24214.2 Da PI: 4.5689 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 116.4 | 1.8e-36 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCk+lrrkC+++C++apyf ++ +++f +vhk+FGasnv+kll +lp ++r+da+ +l yeA ar++dP+yG+v+ il+lq+ +++l++e++++ Oeu031351.1 7 SCGACKFLRRKCTSECIFAPYFSYDHaASHFSAVHKVFGASNVSKLLLHLPVQNRSDAAITLSYEALARMQDPIYGCVAYILALQKLVATLEEEIETI 104 6***********************9978*******************************************************************999 PP DUF260 98 kee 100 +++ Oeu031351.1 105 GNQ 107 887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MTGLGSSCGA CKFLRRKCTS ECIFAPYFSY DHAASHFSAV HKVFGASNVS KLLLHLPVQN 60 RSDAAITLSY EALARMQDPI YGCVAYILAL QKLVATLEEE IETIGNQMAN IGVDAPNYVT 120 SQETNVPNGV LQFSSVYTNV NDHINQQSLQ LQQPENLSAN QACSSQMNVQ FPQENLFEEE 180 IFQAYSDSSV FDRFYEELNQ DMYLKSQWMC STLNSR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06080.1 | 1e-58 | LBD family protein |