PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu031330.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 1400aa MW: 155797 Da PI: 7.3005

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu031330.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00053	1285	1310	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC C +sF++k +L H r+ + Oeu031330.1 1285 HKCDleGCRMSFKTKAELLLHKRNqC 1310 789999****************9877 PP
2	zf-C2H2	11.5	0.00091	1368	1394	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ dCg +F+ s++ rH r+ H Oeu031330.1 1368 YVCKvkDCGLTFRFVSDFSRHRRKtgH 1394 99*********************9776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1400 aa Download sequence
MKDVEIPKWL NGLAMAPEFR PTDTEFADPI AYISKIEKQA SAFGICKIIP PLPKPSKKYV 60 LFNLNKSLSK CSELGSDLNL MSKTDNADRI KYNGGVSRAV FTTRHQELGS EKGRKEKGVG 120 CQVSGAQKQV WQSGEVYTLE QFEAKSKNFA KGQFGMVKEV NPLIVEAMFW RVASGEKPVY 180 VEYANDVPGS GFGEPVGSLR HFYRHKRRRR KRKSFNRNNL GSSDSKDDQV DAVNSGSLDK 240 VSGRQKDFGL CKETASNSLP SMQLHQAASF SGDRDLDCTS ELEGTAGWKL SNSPWNLQVI 300 ARSAGSLTRF MPDDIPGVTS PMVYVGMLFS WFAWHVEDHE LHSLNFLHMG APKTWYAVPG 360 DYAFNFEEVI RLYGYGGKTD RLAALSLLGE KTTVLSPEVI VASNIPCCRL VQYPGEFVVT 420 FPRAYHIGFS HGFNCGEAAN FGTPEWLAIA KEAAVRRAAM NYLPMLSHQQ LLYLLTMSFI 480 SRIPRSLLPG VRSSRCRDRQ KEERELLVKK AFIQDILNEN NLLTILLRRN PLYHVVLWDL 540 ELLPSSSKES EFCNGADAAL LTSSEKACPE DNDNQDHFSQ LSRCINAVGF DLDDDDLAYD 600 FHIDSGTLPC VACGILGFPF MAVVQPSEEA SKTLLLEDRH TIQDLEVFRP VESHSLSDLD 660 HMVEASIPVV ESSQPTHSPI EQSPISDHPS SPKSDSASSK VKTAMGWNIS GAFEKPRLFC 720 LEHAIEIEGL LSTKGGAKVL VICHSDFQKI KGHAAATAEE IFVPFNYNEI PLDRASQEDL 780 YLVDIAIDRE EQTGCLEDWT SQMSINLQHC VKVKKNFPSK NVKHLLTLGG LFSDATTNLN 840 SSSSYWKSRK LRTKRHLKHP LQSISTDGLK ITKDEEDSRS KLEHQTARKE VKVIQYSRRK 900 FKSRSSAGVN EAPKDSNDHV LQNVQAVDDV DQEKEAKSTT ESIIVGVALA SGGQSECERI 960 KFSQTGGCDE NFLPLQCANS FTSATPVVEN VAAQAMICSS DGLMVKENVR GSTWCDPKVQ 1020 HEIKVEGNFE ENRRCYLDNS DSAPPAEAGG CHSGKFSGSS AVSSQSNSKM ENARKKHVMK 1080 ETDSEASDTL SCKGHNKVQT DTDNQDKAVP VGQHEILTGG DNQEKAVSGG QQEIQRDRDD 1140 QSTDFSIGTG LVEEYTSTLV EELHVASNIP ASMESCGDNS SDVSFPKQRQ PNYSNSTAVQ 1200 SEPILECGRK RKREVDLLTQ DQLHVGGFIV SPCESLRPRG RKDASVSGTD CKNPVEEKLP 1260 VKRVRNASAD SIPHKDKKEN ETRPHKCDLE GCRMSFKTKA ELLLHKRNQC PVNGCRKKLS 1320 SHKYAVMHQR VHDDDRPLKC PWKGCTMSFK WAWARTEHIR VHTGERPYVC KVKDCGLTFR 1380 FVSDFSRHRR KTGHHVKVS*

Sequence ? help Back to Top

Protein Sequence Length: 1400 aa Download sequence

MKDVEIPKWL NGLAMAPEFR PTDTEFADPI AYISKIEKQA SAFGICKIIP PLPKPSKKYV  60
LFNLNKSLSK CSELGSDLNL MSKTDNADRI KYNGGVSRAV FTTRHQELGS EKGRKEKGVG  120
CQVSGAQKQV WQSGEVYTLE QFEAKSKNFA KGQFGMVKEV NPLIVEAMFW RVASGEKPVY  180
VEYANDVPGS GFGEPVGSLR HFYRHKRRRR KRKSFNRNNL GSSDSKDDQV DAVNSGSLDK  240
VSGRQKDFGL CKETASNSLP SMQLHQAASF SGDRDLDCTS ELEGTAGWKL SNSPWNLQVI  300
ARSAGSLTRF MPDDIPGVTS PMVYVGMLFS WFAWHVEDHE LHSLNFLHMG APKTWYAVPG  360
DYAFNFEEVI RLYGYGGKTD RLAALSLLGE KTTVLSPEVI VASNIPCCRL VQYPGEFVVT  420
FPRAYHIGFS HGFNCGEAAN FGTPEWLAIA KEAAVRRAAM NYLPMLSHQQ LLYLLTMSFI  480
SRIPRSLLPG VRSSRCRDRQ KEERELLVKK AFIQDILNEN NLLTILLRRN PLYHVVLWDL  540
ELLPSSSKES EFCNGADAAL LTSSEKACPE DNDNQDHFSQ LSRCINAVGF DLDDDDLAYD  600
FHIDSGTLPC VACGILGFPF MAVVQPSEEA SKTLLLEDRH TIQDLEVFRP VESHSLSDLD  660
HMVEASIPVV ESSQPTHSPI EQSPISDHPS SPKSDSASSK VKTAMGWNIS GAFEKPRLFC  720
LEHAIEIEGL LSTKGGAKVL VICHSDFQKI KGHAAATAEE IFVPFNYNEI PLDRASQEDL  780
YLVDIAIDRE EQTGCLEDWT SQMSINLQHC VKVKKNFPSK NVKHLLTLGG LFSDATTNLN  840
SSSSYWKSRK LRTKRHLKHP LQSISTDGLK ITKDEEDSRS KLEHQTARKE VKVIQYSRRK  900
FKSRSSAGVN EAPKDSNDHV LQNVQAVDDV DQEKEAKSTT ESIIVGVALA SGGQSECERI  960
KFSQTGGCDE NFLPLQCANS FTSATPVVEN VAAQAMICSS DGLMVKENVR GSTWCDPKVQ  1020
HEIKVEGNFE ENRRCYLDNS DSAPPAEAGG CHSGKFSGSS AVSSQSNSKM ENARKKHVMK  1080
ETDSEASDTL SCKGHNKVQT DTDNQDKAVP VGQHEILTGG DNQEKAVSGG QQEIQRDRDD  1140
QSTDFSIGTG LVEEYTSTLV EELHVASNIP ASMESCGDNS SDVSFPKQRQ PNYSNSTAVQ  1200
SEPILECGRK RKREVDLLTQ DQLHVGGFIV SPCESLRPRG RKDASVSGTD CKNPVEEKLP  1260
VKRVRNASAD SIPHKDKKEN ETRPHKCDLE GCRMSFKTKA ELLLHKRNQC PVNGCRKKLS  1320
SHKYAVMHQR VHDDDRPLKC PWKGCTMSFK WAWARTEHIR VHTGERPYVC KVKDCGLTFR  1380
FVSDFSRHRR KTGHHVKVS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	211	KRRRRK
2	206	212	KRRRRKR
3	207	213	KRRRRKR
4	207	213	RRRRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein