PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031173.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 340aa    MW: 38347.6 Da    PI: 5.096
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031173.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS243.21e-741133672373
         GRAS  72 knsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLa 166
                  +n++ ++  l  f++++P+++f++ +aN aI eaveg + vHi+D+++++++Q p+L++a+a+R e  p +++T+ g+ e +      ++ee+g++L 
  Oeu031173.1  11 NNHKFSIIELASFVDLTPWHRFGYTAANAAIIEAVEGYSVVHIVDISLTHCIQIPTLIDAIATRFEAVPLVKLTVAGHTEDFppmLDLSYEELGSKLV 108
                  456667777778******************************************************************888898888999******** PP

         GRAS 167 kfAeelgvpfefnvl...vakrledleleeLrvkp....gEalaVnlvlqlhrll................desvsles.erdevLklvkslsPkvvv 240
                  +f ++ +v +ef+v+   +++ +++l +eeLr+++    gEal++n++++lh+++                 e+ s++s  r+ +L++++sl P++v+
  Oeu031173.1 109 SFSRSRNVVMEFSVIpssASNGFSSL-IEELRMQHrgenGEALVINSHMMLHYIPdetlpvvqntsspqisIETCSSNSfLRSMFLEALRSLDPTIVI 205
                  **************987555567777.99**99988999****************************9998666666667899*************** PP

         GRAS 241 vveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqak 338
                  +v+++ad +s+++++r+ +a +y +  fds+++ lp+ s++r+++E+  + ++i+nv+a+eg +r+er e ++kW +r+++a F+ +++se+a +++k
  Oeu031173.1 206 LVDEDADFTSNNLVHRLRSAYNYLWIPFDSVDTFLPQGSKQRQWYEAD-ICWKIENVIAHEGPQRVERLEPKSKWVQRMRNASFRGISFSEEAITEVK 302
                  ************************************************.************************************************* PP

         GRAS 339 lllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  ++l +++  g+ ++ e++ +vl+Wk++++v+++aW
  Oeu031173.1 303 SMLDEHA-AGWGLKREEEDVVLTWKGHNVVFATAW 336
                  *******.8999*********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MANVHTNLAM NNHKFSIIEL ASFVDLTPWH RFGYTAANAA IIEAVEGYSV VHIVDISLTH  60
CIQIPTLIDA IATRFEAVPL VKLTVAGHTE DFPPMLDLSY EELGSKLVSF SRSRNVVMEF  120
SVIPSSASNG FSSLIEELRM QHRGENGEAL VINSHMMLHY IPDETLPVVQ NTSSPQISIE  180
TCSSNSFLRS MFLEALRSLD PTIVILVDED ADFTSNNLVH RLRSAYNYLW IPFDSVDTFL  240
PQGSKQRQWY EADICWKIEN VIAHEGPQRV ERLEPKSKWV QRMRNASFRG ISFSEEAITE  300
VKSMLDEHAA GWGLKREEED VVLTWKGHNV VFATAWLPI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-144GRAS family protein