PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu030696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 446aa MW: 50845.5 Da PI: 5.357 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.5 | 4e-10 | 15 | 60 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+W+ eEd +l + ++ G +W++ +++ g+ R++k+c++rw +yl Oeu030696.1 15 GAWS-EEDNKLREHIQSSGHSNWRLLPQYAGLARSGKSCRLRWVNYL 60 5565.89**************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.1 | 9.5e-14 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eE +l+ ++++lG++ W+ Ia+ ++ gRt++++k++w+ Oeu030696.1 66 RGNYSKEEVDLIMGLHAKLGNK-WSDIAKNLP-GRTDNDIKNYWHA 109 899*******************.*********.***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence |
MVKPCYVDGN GIKKGAWSEE DNKLREHIQS SGHSNWRLLP QYAGLARSGK SCRLRWVNYL 60 KPGVKRGNYS KEEVDLIMGL HAKLGNKWSD IAKNLPGRTD NDIKNYWHAH VKKRLKRNVT 120 GTSSLSEISQ EEPDKDFVMA ESSCIQELEN SEAASQGGVQ SMIERYEEQH SSPRTEGQSQ 180 SSHSHYEPMT ELSPRTMRAL LGKLTQDIVE QSLNVSKGRS PKRMKTSCVQ GAKEQGPPFE 240 RQFRLVNNGR TFRPQPRQPN GMQRPKVPKL LEVANQNVLK DSEETGTGES MEELPETSFG 300 RSKFERDRRD GEDPDQLLTI QFCTLPPVMA NNYLLANEFK NEEKEEEERE DNEEETCVLE 360 CEEDQTSRGA YDDEGDDGMT DIEEKIDLEA ERRKRGVSYN TLLKQLHRER GEAEVVQVDH 420 RSFVAEANSV ERFMYEGNYG PVRVV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 5e-47 | MYB family protein |