PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030527.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 457aa MW: 51572.7 Da PI: 10.0099

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030527.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.3	2e-09	28	72	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT+eE +++ +a +++ ++ +W+ +a++++ g+t +++ + Oeu030527.1 28 KWTPEENKRFENALALFDKNtpdRWNNVAAMIP-GKTVSDVIKQYM 72 8******************************.****998886 PP
2	Myb_DNA-binding	45.3	2e-14	135	179	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky Oeu030527.1 135 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 179 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MNRGIGFQSP ASYMSTSNWL FQESVATKWT PEENKRFENA LALFDKNTPD RWNNVAAMIP 60 GKTVSDVIKQ YMELVEDVND IEAGIIPIPG YNNNSFTLDW VNNQCYDGYR SPCGSAGSRH 120 SSTRLSEHER KKGVPWTEEE HRQFLLGLKK YGKGDWRNIS RNFVTTRTPT QVASHAQKYF 180 IRQLSGGKDK KRSSIHDITT VDLTEMKSPS SDKDRPQSPD KSTFVMHFQQ NSVCNQPNQG 240 ARTAFNLPNS SLITTHLRGT RFKSIGLLGY PAAYITALSL DVYRNDKGLQ PKISWRCIKN 300 PISSLHLFDS TTHHPSYTHT DAVLYHILHR LSLSIDSKLL PHVTRIVDLI RTQKCPCLED 360 TVLVVMKAYS KNSMVDKAME LFQKMREIFG CEPGVRNFRG ASKKKTITIV EGKGTPAAGA 420 TMVGERNELR SQVGRRFWWQ PPMESRLGVV PWGGVG*

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MNRGIGFQSP ASYMSTSNWL FQESVATKWT PEENKRFENA LALFDKNTPD RWNNVAAMIP  60
GKTVSDVIKQ YMELVEDVND IEAGIIPIPG YNNNSFTLDW VNNQCYDGYR SPCGSAGSRH  120
SSTRLSEHER KKGVPWTEEE HRQFLLGLKK YGKGDWRNIS RNFVTTRTPT QVASHAQKYF  180
IRQLSGGKDK KRSSIHDITT VDLTEMKSPS SDKDRPQSPD KSTFVMHFQQ NSVCNQPNQG  240
ARTAFNLPNS SLITTHLRGT RFKSIGLLGY PAAYITALSL DVYRNDKGLQ PKISWRCIKN  300
PISSLHLFDS TTHHPSYTHT DAVLYHILHR LSLSIDSKLL PHVTRIVDLI RTQKCPCLED  360
TVLVVMKAYS KNSMVDKAME LFQKMREIFG CEPGVRNFRG ASKKKTITIV EGKGTPAAGA  420
TMVGERNELR SQVGRRFWWQ PPMESRLGVV PWGGVG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	1e-108	MYB family protein