PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu030264.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 102aa    MW: 11673.4 Da    PI: 10.0278
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu030264.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.83e-28959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+ien+s r vtfskR+ng+lKKA ELSvLCdaeva+iifs++g+l+ +ss
  Oeu030264.1  9 KFIENESSRLVTFSKRKNGLLKKARELSVLCDAEVALIIFSQKGRLFQFSS 59
                 79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MVRGKIQMKF IENESSRLVT FSKRKNGLLK KARELSVLCD AEVALIIFSQ KGRLFQFSSS  60
NMENTIEKYL EHGKEEETTT NNTEVQQHVQ VLSFKKNVTF S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-35MIKC_MADS family protein