PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030250.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 420aa MW: 46434.8 Da PI: 6.7939

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030250.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.4	2.4e-15	342	403	1	62
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkryk 62 +W+ +ev++Lie+r e+++r++ + +++lWee+s+++ + g++rs+ qCk+ w +l ++y+ Oeu030250.2 342 KWKPEEVKQLIELRGELHSRFQVLRGRMALWEEISSNLLSDGITRSAGQCKSLWTSLIQKYE 403 7********************************************************99995 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MYNLDEVLKI VKPQHFLPIH GELVFLKEHE LLGKSTGIHH TAVIKNGEML GVSHLRNRRV 60 LSNGFISLGK ENLQLMYSDG DKAFGTASEL CVDERMRIAS DGIIVVSMEI LRPQAINGSV 120 EAALKGKIRI TTRCLWLDKG KLLDALHKAA HASLSSCPVN CPLAHMERTV SEVLRKMVRK 180 YSSKRPEVIA IAIENPDAVL ADEINGKLSG KSHVGFGIPA LKKAVDGHQK SRQLSGTLED 240 DGNGLASTAE QELQVHDIDN AGLLDEKETS SSSEPENSPN GDDNSDDFWK SFVVPSVVNQ 300 SEGNSSFLPE PERDEVARME NSELDPSTPK SRLKPKTAKR NKWKPEEVKQ LIELRGELHS 360 RFQVLRGRMA LWEEISSNLL SDGITRSAGQ CKSLWTSLIQ KYEVHFCISS VEVTTHCSY*

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MYNLDEVLKI VKPQHFLPIH GELVFLKEHE LLGKSTGIHH TAVIKNGEML GVSHLRNRRV  60
LSNGFISLGK ENLQLMYSDG DKAFGTASEL CVDERMRIAS DGIIVVSMEI LRPQAINGSV  120
EAALKGKIRI TTRCLWLDKG KLLDALHKAA HASLSSCPVN CPLAHMERTV SEVLRKMVRK  180
YSSKRPEVIA IAIENPDAVL ADEINGKLSG KSHVGFGIPA LKKAVDGHQK SRQLSGTLED  240
DGNGLASTAE QELQVHDIDN AGLLDEKETS SSSEPENSPN GDDNSDDFWK SFVVPSVVNQ  300
SEGNSSFLPE PERDEVARME NSELDPSTPK SRLKPKTAKR NKWKPEEVKQ LIELRGELHS  360
RFQVLRGRMA LWEEISSNLL SDGITRSAGQ CKSLWTSLIQ KYEVHFCISS VEVTTHCSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	1e-156	Trihelix family protein