PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu030084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WRKY | ||||||||
Protein Properties | Length: 244aa MW: 26961.1 Da PI: 5.0716 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89.1 | 3.6e-28 | 63 | 120 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+sa gCp++k+vers+ +p + itY eHnh+ Oeu030084.1 63 DSWSWRKYGQKPIKGSPYPRGYYRCSSAkGCPARKQVERSRLEPIKLLITYFCEHNHP 120 99************************999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MEAKCQEQEP QENDVDSPLS GDEATEGIYE PSPKKRKEAN KRVVTVPIGD GGRSKGEVYP 60 PPDSWSWRKY GQKPIKGSPY PRGYYRCSSA KGCPARKQVE RSRLEPIKLL ITYFCEHNHP 120 LVATTKHHHH HHLSTDSNST STSLPAKFPP EECAVFASQP DLEPADNSFS ELAGELGWLA 180 DLESTVMDCP TLVGPSWAHS DVEVFMPIGE EDESLYGDLG DLPESLVVLR RRGVETPCCE 240 GTR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 1e-57 | WRKY family protein |