PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030037.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 520aa MW: 58516.1 Da PI: 10.0388

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030037.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	288	310	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F+ +nL+ H+ + H Oeu030037.1 288 SCPECGEIFTKAENLELHQAVrH 310 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MAKSKNPRKL TKKHQFNQNM YSQKQEKQHS WVVVRNLFTC KYVQVQQQEQ KEQQNQEHQD 60 GHKEKRQEQK QKQKQKLKLK QKPQEQPLPP PIPPEESHQK CKNTKQPKEN QPPPPNKMKP 120 KQEPPAAEES NQKYKKMKEP IKEPPPEESN QKCKKLKQAK NEQTLEEMNK KSKKMKCSGS 180 LCSNTKIMQR PEISSPTETQ KKRSLMASSS SEIDGSNRST RTTLSELNGT GFSSSSSSLS 240 VSCASPSISG SFRGMPFRKL SGCYECRMVV DPVLGMTRDP SLRATISSCP ECGEIFTKAE 300 NLELHQAVRH AVSELGPEDT SKNIVEIIFQ SSWLKKQTPV CKIDRILKVQ NTPKTISRFE 360 EYRDSIKAKA TRLHKKHPRC IADGNELLRF HCTTFMCSLG LNGSSNLCNS IPSCNVCSII 420 KNGFKVNAEA VTGFFQKGIL TTASSGKAHD RARVGSDDEK RAMLVCRVIA GRVKKNVEGS 480 MEEYDSLAGV AGTYPNLDEL YVFNPKAILP CFVVIYTGF*

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MAKSKNPRKL TKKHQFNQNM YSQKQEKQHS WVVVRNLFTC KYVQVQQQEQ KEQQNQEHQD  60
GHKEKRQEQK QKQKQKLKLK QKPQEQPLPP PIPPEESHQK CKNTKQPKEN QPPPPNKMKP  120
KQEPPAAEES NQKYKKMKEP IKEPPPEESN QKCKKLKQAK NEQTLEEMNK KSKKMKCSGS  180
LCSNTKIMQR PEISSPTETQ KKRSLMASSS SEIDGSNRST RTTLSELNGT GFSSSSSSLS  240
VSCASPSISG SFRGMPFRKL SGCYECRMVV DPVLGMTRDP SLRATISSCP ECGEIFTKAE  300
NLELHQAVRH AVSELGPEDT SKNIVEIIFQ SSWLKKQTPV CKIDRILKVQ NTPKTISRFE  360
EYRDSIKAKA TRLHKKHPRC IADGNELLRF HCTTFMCSLG LNGSSNLCNS IPSCNVCSII  420
KNGFKVNAEA VTGFFQKGIL TTASSGKAHD RARVGSDDEK RAMLVCRVIA GRVKKNVEGS  480
MEEYDSLAGV AGTYPNLDEL YVFNPKAILP CFVVIYTGF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-102	C2H2 family protein