PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu029866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 259aa MW: 28678.8 Da PI: 7.9598 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.8 | 8e-05 | 92 | 114 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C ++F ++ L H++ H Oeu029866.1 92 FSCNYCQRTFYSSQALGGHQNAH 114 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MSTSKDEFIS GTLGIHSPLE TPLQNLQENN LDGDEKQELN RGSKRESKLK ISGENFDPKS 60 NLELNLIDCL EKAPSSTSPE TPEASDDEPR VFSCNYCQRT FYSSQALGGH QNAHKRERIL 120 AKRRHSLGTS YMAAFGQSHN HYPSMSALPL NGSFSNSLGI QAHSTIHKPS HALGASGCRS 180 FYRHAGWSRI PNEQQPSVGK LAVQKYNSSA SNELFPRSDT VTSSIVRKST DCPQDWMEVF 240 HLKTNQDSLQ KLDLSLKL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 6e-39 | C2H2 family protein |