PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu029715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 368aa MW: 41758.9 Da PI: 4.9007 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.4 | 1.6e-18 | 114 | 160 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++v q+G+++W+ Ia++m R +kqc++rw+++l Oeu029715.1 114 KGQWTEEEDRKLIELVMQYGPRNWTMIAEKMV-LRAGKQCRERWLNHL 160 799*****************************.9************97 PP | |||||||
2 | Myb_DNA-binding | 43.7 | 6.5e-14 | 166 | 204 | 5 | 45 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++eE+ ll++++k+ G++ W+ Ia+++ gRt++++k++w+ Oeu029715.1 166 SEEEERLLIEVHKRVGNK-WAEIAKYIA-GRTENSIKNHWN 204 79****************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 368 aa Download sequence |
MADGSTIRMS EGSLAFRRFV SRNGLLSVFV DDERKESAME GMIPMKEENV DPWRSLMAGG 60 STIRMSEGSL AFSEVAWNQD EHVNENSNEV KLTSESPDPR EKREKVQPDG YLIKGQWTEE 120 EDRKLIELVM QYGPRNWTMI AEKMVLRAGK QCRERWLNHL RPNIKSEEEE RLLIEVHKRV 180 GNKWAEIAKY IAGRTENSIK NHWNATKRRK ISRTKIKKPR GENGTRQSTL LQDYIQNKYM 240 DNGSGFTSTS TTSYDAATTI TPPSSTVPEA EGQSFFTFET FEEEMDFMKN LFGNNDSSNN 300 ASMVDKGKAM MYPPAASEMN MQINEDAFLY SEFLDSAIGL TLDLPMNQDP SLEGRMEGDL 360 MGIVSSC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11050.1 | 5e-47 | MYB family protein |