PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029424.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 362aa    MW: 41526.7 Da    PI: 5.1411
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029424.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH185.2e-0690113226
                  -S---SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                  k  lC f+ + G+C  G +CkF+H+
  Oeu029424.1  90 KSILCEFYKA-GQCAKGFKCKFSHD 113
                  6679**7777.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MPPKQQSKAD LAKKQKVVED KTFGLKNKNK SKNVQKYVQS LKQSVQPRPD SSKIDAKKKK  60
EEERAKEKEL NELFKVAVSQ PKVPPGVDPK SILCEFYKAG QCAKGFKCKF SHDLNVQRKG  120
EKIDIYSDKR DEENEKETME DWDQETLEKV VQSKSQEYNK NKPTDIVCKY FLEAVEKKQY  180
GWFWVCPNGG KDCHYRHALP PGYVLKSQMK ALIEEEADKI PIEEEIENQR AKITASTPMT  240
PELFMQWKKR KVEEREAGLA ALWAERAKND RMSGRELFLS DASLFVDDAE AYDKYQREEE  300
PDAEQKVDKG SSMYVASSST ATTRDINDVD DDDDDLNMDE LNELEASLSK TTLQIREPGD  360
V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.11e-160C3H family protein