PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029286.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 818aa MW: 91993.5 Da PI: 6.1205

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029286.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	108.1	5.9e-34	141	218	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++Cead+se+k yhr h++C +++a++v+++g+++r+Cq+C++fh ls+fDe+krsCr++L+khnerrr++++ Oeu029286.1 141 RCQVPECEADISELKWYHRSHRICLRCANASAVILDGESKRYCQKCGKFHILSDFDEDKRSCRTKLEKHNERRRRRNN 218 6*************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MQQKSTSPPA VTPSYLSQIL EFPSTDAGNV TDDYSLFDWS NFLDFDLDDN LNLAFDPQAI 60 HGPESESGPS VDPVQSQSQQ YNDSTRVRKR DPRLVCSNFL AGRVPCACPE LDQKLEEEAS 120 RDHPGKKRVR TVRIPAGATA RCQVPECEAD ISELKWYHRS HRICLRCANA SAVILDGESK 180 RYCQKCGKFH ILSDFDEDKR SCRTKLEKHN ERRRRRNNDS DGSIEKESQQ VVLVDDVSCD 240 DDTGKGLQAT LRCPSPAPQG CDRVAAGAAA PKVWRHNANN SIFLSSQIVD RETFLESEGH 300 LSTISSGQSD SFLLFAASGE TRVDRDKQNP KQKYSSSCEN KIPFFSAFAA GRISFKLYDW 360 NPADFPRRLR HQIFEWLAHM PVELEGYIRP GCTILTAFLA MPKLMWFKLL EEPAECIQEL 420 LASPENMLSG RMHVFLDNKI FLVVKDVCVE EVNVKERAPK LHSVYPTCFE AGKPMEFIAC 480 GTNLLQPQFR FLISFGGRYL AYNICVLSVG RKKEGDTNSA DHQLLKIYVP PTDLYLFGPA 540 FIEVENQSGL SNFIPVLIGN KEVCEEMVVL QQKFNASHDS EEQQLSFPKP ACEILASRQD 600 EFSVFLLEVA WSLKKPISEQ QLTSTQMQRF NYLLNFLIEW ESTIILERVL DCMKSTMDNN 660 LVVGNSDADM KLFCGNISNA RNILNRKQEE NEYSVLHVSD GKLSSQSSQF DCQSSVPATN 720 RGLETKNALQ QRVVLPSLDE SETVRLLNGE VLMGVNLKEM PGKSCRRLFT RTVLTSRPLV 780 FAIAAVGVCF GICAVVLHPQ KVSELTTTIR RCIFDNS*

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MQQKSTSPPA VTPSYLSQIL EFPSTDAGNV TDDYSLFDWS NFLDFDLDDN LNLAFDPQAI  60
HGPESESGPS VDPVQSQSQQ YNDSTRVRKR DPRLVCSNFL AGRVPCACPE LDQKLEEEAS  120
RDHPGKKRVR TVRIPAGATA RCQVPECEAD ISELKWYHRS HRICLRCANA SAVILDGESK  180
RYCQKCGKFH ILSDFDEDKR SCRTKLEKHN ERRRRRNNDS DGSIEKESQQ VVLVDDVSCD  240
DDTGKGLQAT LRCPSPAPQG CDRVAAGAAA PKVWRHNANN SIFLSSQIVD RETFLESEGH  300
LSTISSGQSD SFLLFAASGE TRVDRDKQNP KQKYSSSCEN KIPFFSAFAA GRISFKLYDW  360
NPADFPRRLR HQIFEWLAHM PVELEGYIRP GCTILTAFLA MPKLMWFKLL EEPAECIQEL  420
LASPENMLSG RMHVFLDNKI FLVVKDVCVE EVNVKERAPK LHSVYPTCFE AGKPMEFIAC  480
GTNLLQPQFR FLISFGGRYL AYNICVLSVG RKKEGDTNSA DHQLLKIYVP PTDLYLFGPA  540
FIEVENQSGL SNFIPVLIGN KEVCEEMVVL QQKFNASHDS EEQQLSFPKP ACEILASRQD  600
EFSVFLLEVA WSLKKPISEQ QLTSTQMQRF NYLLNFLIEW ESTIILERVL DCMKSTMDNN  660
LVVGNSDADM KLFCGNISNA RNILNRKQEE NEYSVLHVSD GKLSSQSSQF DCQSSVPATN  720
RGLETKNALQ QRVVLPSLDE SETVRLLNGE VLMGVNLKEM PGKSCRRLFT RTVLTSRPLV  780
FAIAAVGVCF GICAVVLHPQ KVSELTTTIR RCIFDNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein