PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029234.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 274aa    MW: 31029.9 Da    PI: 4.7267
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029234.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF35.11.6e-1113511250
                 HHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                  f +R++ i  K  ELS+LCd++++ +i++++g++  ++
  Oeu029234.1 13 AFLRRKECIKRKTMELSTLCDVKACAVILGPDGQIDSWP 51
                 6999*******************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MADADVLKAK KKAFLRRKEC IKRKTMELST LCDVKACAVI LGPDGQIDSW PENRSEVQEV  60
INLYQNGSSN KKRKQQYDDR GCNKKQVLGG DEGALNPEEF LKKIDAKLGE VKNRIQFLRS  120
KEQEIEPDVA CCLNCFRFRW FVAQNVTFST STLISWPQKD SQNLGSHSNV GMLEFGNQLP  180
VDIVSSIGGF PSNLDAMDFG PETSFQSSQA AFPQLQQQLH MEQPWNCMDS PFWFEPESAL  240
LTGSDQFLQS YIDNNDESSW MQSPQFQENT FLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39810.13e-13M-type_MADS family protein