PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029080.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 394aa MW: 45085.5 Da PI: 5.3654

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029080.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.3	1.7e-18	122	168	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++v q+G+++W+ Ia++m R +kqc++rw+++l Oeu029080.1 122 KGQWTEEEDRKLIELVMQYGPRNWTMIAEKMV-LRAGKQCRERWLNHL 168 799***************************.9**********97 PP
2	Myb_DNA-binding	46.5	8.5e-15	174	216	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eE+ ll++++k+ G++ W+ Ia+++ gRt++++ ++w+ Oeu029080.1 174 KDDWSEEEERLLIEVHKRVGNK-WAEIAKYIA-GRTENSINNHWN 216 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MEIGGNCFMY GNLRDNSSFF QQKPPLTATD KFSSSQNNFY YQETLNSVQN QLPFFSPNLF 60 SGFSANKLPE TSFGNETLPY AEVAWNQDEH VNENSNEVKL TSESSDSREK REKVQPDGYL 120 IKGQWTEEED RKLIELVMQY GPRNWTMIAE KMVLRAGKQC RERWLNHLRP NIKKDDWSEE 180 EERLLIEVHK RVGNKWAEIA KYIAGRTENS INNHWNATKR RKIKRTKIKK PRGENGKRQS 240 TLLQDYIQNN YMDNCSGFTS TSTTSYAAAT TITPPSSTVP EVEGQPFFTF ETCEEEMDFM 300 KNLFGNNDSS NNASMVDKGK AMMYPPAASE MKMQINEDAF LYPHFLDSAI GLTLDLPMNQ 360 DPSLEGRMEG DLMGMVSSCQ FSHPKLINNS NTM*

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MEIGGNCFMY GNLRDNSSFF QQKPPLTATD KFSSSQNNFY YQETLNSVQN QLPFFSPNLF  60
SGFSANKLPE TSFGNETLPY AEVAWNQDEH VNENSNEVKL TSESSDSREK REKVQPDGYL  120
IKGQWTEEED RKLIELVMQY GPRNWTMIAE KMVLRAGKQC RERWLNHLRP NIKKDDWSEE  180
EERLLIEVHK RVGNKWAEIA KYIAGRTENS INNHWNATKR RKIKRTKIKK PRGENGKRQS  240
TLLQDYIQNN YMDNCSGFTS TSTTSYAAAT TITPPSSTVP EVEGQPFFTF ETCEEEMDFM  300
KNLFGNNDSS NNASMVDKGK AMMYPPAASE MKMQINEDAF LYPHFLDSAI GLTLDLPMNQ  360
DPSLEGRMEG DLMGMVSSCQ FSHPKLINNS NTM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	2e-51	MYB family protein