PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu028885.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 324aa    MW: 36425 Da    PI: 6.5739
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu028885.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.31.7e-181562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l+++++++G+g+W + +++ g++R++k+c++rw +yl
      Oeu028885.1 15 KGPWTLEEDKKLIEYIHEHGTGRWQLLPEKAGLNRCGKSCRLRWTNYL 62
                     79********************************************97 PP
2Myb_DNA-binding54.72.4e-1768112147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ +E++ +++++ ++G++ W+tIa++++ gRt++++k++w++ 
      Oeu028885.1  68 RGNFSHDEEQTIIHLHSLHGNK-WSTIASHLP-GRTDNEIKNFWNTN 112
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGRPPSSNAD NRLKKGPWTL EEDKKLIEYI HEHGTGRWQL LPEKAGLNRC GKSCRLRWTN  60
YLRPDIKRGN FSHDEEQTII HLHSLHGNKW STIASHLPGR TDNEIKNFWN TNLRKKLLRS  120
GIDPNTHQPI TDANLLNLLP TSSFTNSMDP WQYVLKLQAD QVTEFAKIRV LQNILRVLST  180
SPLPIIGTNC LGESHNPSQY GELVNHDDPL QLLSNPVLPH IANIEELPEE LATIFNSKET  240
IPEILDNQTN GFGISKSHAE YSLPGLVSAN TGTSTANQMD SIYSMHIPNQ SLTSNSFETL  300
GYLMDDDASS SLWKDVYKLS NIL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.25e-72MYB family protein