PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu028622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | Whirly | ||||||||
Protein Properties | Length: 168aa MW: 18379.5 Da PI: 9.6727 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 83.9 | 2.2e-26 | 78 | 146 | 58 | 126 |
Whirly 58 satevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPv 126 ate+++l++l++k+sceffhdp++ +sn+G+vrk+l+++ + +G G+f++l+v n+++k+n++f+v v Oeu028622.1 78 VATEIGSLISLGPKDSCEFFHDPSMLSSNAGQVRKSLSIKVHDNGGGYFISLNVVNNILKTNDRFVVLV 146 68***************************************************************7754 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MFSPLLQGGE VVTNFVLLLV YSGKSAAKIF APYSIYKGKA ALSASPILPR FSKLEASGGF 60 RVDRRGLVFP ECLYLCFVAT EIGSLISLGP KDSCEFFHDP SMLSSNAGQV RKSLSIKVHD 120 NGGGYFISLN VVNNILKTND RFVVLVPIFF FFFTLRAYQF VVSSIVQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 7e-48 | Whirly family protein |