PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu028268.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 330aa    MW: 37434.4 Da    PI: 9.3322
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu028268.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.6e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ eEd++l+ +++q+G g+W+  +++ g+ R++k+c++rw +yl
      Oeu028268.1 15 KGPWSREEDQKLLAYIEQHGHGRWRDLPAKAGLQRCGKSCRLRWTNYL 62
                     79********************************************97 PP
2Myb_DNA-binding50.93.6e-1668111146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w++
      Oeu028268.1  68 RGKFSLQEEKTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNT 111
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGRSLTSLEK VDMKKGPWSR EEDQKLLAYI EQHGHGRWRD LPAKAGLQRC GKSCRLRWTN  60
YLRPDIKRGK FSLQEEKTII QLHALLGNRW SAIATHLPKR TDNEIKNYWN TRLKKRLSRM  120
GIDPVTHKPK NHSGGAQSKN AANLSHMAQW ESARLEAEAR FLRQSKLVSN PYFSHHHHDS  180
TVLPPLAPQR PPPPCLDILK VWQRTSKSFF TPSGTLESPT STLNFSSSML PVEEPHRSIP  240
NFFVPSTNAI SVENSGALCV SQNPHNSLMA NDIMENPMQL MDHYNHNAVS LEDLPISVDH  300
YNIDAGPEGF EEVKDYWNDI LNSVNSPIL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.12e-97MYB family protein