PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu027973.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 295aa    MW: 31962 Da    PI: 4.8696
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu027973.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.7e-09246345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +W+ ++d+l  da k+++ +   +W++Ia++++ g++++++k +++
      Oeu027973.1  2 KWSVDDDKLYEDALKEFPEEvenRWEKIASRLP-GKSPEDVKAHYN 46
                     8*****************99*************.***********8 PP
2Myb_DNA-binding36.79.5e-12103147347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rWT+eE+ l++++ +++G+g+ + Ia+++   Rt+ q+ s+ + y
      Oeu027973.1 103 RWTEEEHRLFLKGLNEYGKGQLTEIAKYVVRSRTPTQVGSHAHRY 147
                      9****************************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MKWSVDDDKL YEDALKEFPE EVENRWEKIA SRLPGKSPED VKAHYNALFV DSLISVFDFP  60
DNEAKADSIN NPIDHDESTE TSIHSCEISS RPSSRVVNDD GPRWTEEEHR LFLKGLNEYG  120
KGQLTEIAKY VVRSRTPTQV GSHAHRYYKR LNINCGAITL QPIRVHRRGR YNMTATNAGG  180
AIEPSPTNLP GQGGKNPADA INGGSMEPSS TNFSSQGGSI SIDAVNNGAM EPPPTNLPSQ  240
GGNNPTDVVN SGEMEPSPTN LPNEGGNNPA DAVTSGEKKP SPTNLPSQEG PHNF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-28MYB family protein