PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu027961.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 807aa    MW: 87259 Da    PI: 5.9825
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu027961.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS414.69.1e-1274407952374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                   +lLl+cAeavs++++e+a+++L ++sela+p g++ qR+aayf eA++ar+++s+ ++y+alp+ + s    +++++a+++f+ +sP++kfsh+taN
  Oeu027961.1 440 LTLLLQCAEAVSADNMEEANRMLLEISELATPFGTSAQRVAAYFSEAMSARIVNSCLGIYAALPMVPHS----QKTASAFQVFNGISPFVKFSHFTAN 533
                  579**************************************************************9996....788999******************* PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  qaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fAe+lg+pfef++ va+++ +l++++L+++
  Oeu027961.1 534 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT----SMEALEATGKRLSDFAEKLGLPFEFSP-VADKIGNLNPQRLSIS 626
                  **************************************************....***************************.7*************** PP

         GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                  + Ea+aV++    h+l+d ++s ++     L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl a +++eseer+ vE++ll+rei+
  Oeu027961.1 627 ETEAVAVHWLQ--HSLYDVTGSDTN----ALWLLQRLCPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGACYGEESEERHIVEQQLLSREIR 717
                  **********9..999999999999....**********************.899******************************************* PP

         GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  nv+a  g +r  + + +++Wre+l+++GFk v+l+ +aa+qa lll +++sdgy++ e++g+l lgW+d  L+++SaWr
  Oeu027961.1 718 NVLAVGGPSRSGEVK-FNNWREKLQQSGFKGVSLGGNAAAQATLLLGMFPSDGYTLVEDNGALKLGWRDLCLLTASAWR 795
                  *********888776.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    
MATAFTLKGD NHIASNVNGD GVESSIESPM TAGSSNAPPL HSTTLLDRVP AENGKSTLRK  60
RAASDMELQA GNGGADYHNR FLRRTATTPL GDFGVCSFMS GGDFNSPNPL LRSTHVANYS  120
TTMTMLPSST NLTSAKSGSG SEPAISTPNL NYHHHLQQSQ IQASTSTPSV CVFSGLPLFP  180
PDKTQNPNLL LSPSPVLLPV NSNTSTGGGV ISMEEGAAAT AWIDGIIKDL IHSSNNVSIP  240
QLILNVREII HPCNPNLAAL LEYRLRSLTG TDSVTNYPER RKEALPPVSL QTPDQHGQGQ  300
VQVGTPRLRL YMDDNLFTHG LSESMNQHLS WPGVTQPATV NAAGNSQYLR SNPSAATTIP  360
TSVSFTVPAT MVTDSNDQVR QSPQPETHPE QPMEQQQHSQ SAAAAAMPAT FPSTTAVEAI  420
RERKEEMRQK QRDEDGLHLL TLLLQCAEAV SADNMEEANR MLLEISELAT PFGTSAQRVA  480
AYFSEAMSAR IVNSCLGIYA ALPMVPHSQK TASAFQVFNG ISPFVKFSHF TANQAIQEAF  540
EREDRVHIID LDIMQGLQWP GLFHILASRP GGPPFVRLTG LGTSMEALEA TGKRLSDFAE  600
KLGLPFEFSP VADKIGNLNP QRLSISETEA VAVHWLQHSL YDVTGSDTNA LWLLQRLCPK  660
VVTVVEQDLS HAGSFLGRFV EAIHYYSALF DSLGACYGEE SEERHIVEQQ LLSREIRNVL  720
AVGGPSRSGE VKFNNWREKL QQSGFKGVSL GGNAAAQATL LLGMFPSDGY TLVEDNGALK  780
LGWRDLCLLT ASAWRPSTNH FPSSIQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein