PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu027816.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 336aa MW: 37918.9 Da PI: 8.7655

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu027816.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.8	2.3e-12	44	100	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g Oeu027816.1 44 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 100 57*****************99998898888888******************98 PP
2	AP2	51.4	2.8e-16	143	194	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Oeu027816.1 143 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 194 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MAKTSKKNQK SSSTNSITDK NDAIGKSKRT RKSVPRESPQ QRSSIYRGVT RHRWTGRYEA 60 HLWDKNCWNE SQNKKGRQGA YDDEEAAAHA YDLAALKYWG QDTILNFPLS TYQVELKEME 120 GLSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE 180 AATAYDMAAI EYRGLNAVTN FDLSRYIKSL RPNENNTDHP QPNPNLNPMS NPELGFGVLH 240 LLTQSSSSAE IADTRPQPGI LLQSSKFKEM LEQTTAQDNP SSPLEPGAPR RSFPDDIQTS 300 FEFQESSSFA EEHDIIFGDL NSSFASQIFR SELDA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-97	AP2 family protein