PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu027770.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 367aa MW: 41384.5 Da PI: 9.2375

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu027770.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.7	3.8e-15	65	124	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ ++ +gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g Oeu027770.1 65 SKFRGVSKHRLTGRYEAHLWDkLSWNVtqkKKgKQVYLGAYDDEEAAARAYDLAALKYWG 124 79*****************888855555447***********************98 PP
2	AP2	51.2	3.1e-16	167	218	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV ++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Oeu027770.1 167 SKYRGVAKHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 218 89**************99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MEMGMAKTEV NNRRRPICAV GGDIPEAVCI KRRRRNTAAS TATACALEKI QVDPIYAPTT 60 VKRSSKFRGV SKHRLTGRYE AHLWDKLSWN VTQKKKGKQV YLGAYDDEEA AARAYDLAAL 120 KYWGTSTFTN FPISDYEKEL EFMQTVTKEE YLASLRRKSS GFSRGVSKYR GVAKHHHNGR 180 WEARIGRVFG NKYLYLGTYS TQEEAARAYD IAAIEYRGIN AVTNFDLSNY IRWLKPETNT 240 CVPAQETKPN TESRPVFSTF QSQTKAAGSN QDMFRRKIPI TSSSTPTALG LLLQSSLFRE 300 LVEKNAHVSE EESDGENKKD LPPVSSDDEY GGILYDLPGV QLQRDLHFDY DSTNIYGNNI 360 NMATIC*

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MEMGMAKTEV NNRRRPICAV GGDIPEAVCI KRRRRNTAAS TATACALEKI QVDPIYAPTT  60
VKRSSKFRGV SKHRLTGRYE AHLWDKLSWN VTQKKKGKQV YLGAYDDEEA AARAYDLAAL  120
KYWGTSTFTN FPISDYEKEL EFMQTVTKEE YLASLRRKSS GFSRGVSKYR GVAKHHHNGR  180
WEARIGRVFG NKYLYLGTYS TQEEAARAYD IAAIEYRGIN AVTNFDLSNY IRWLKPETNT  240
CVPAQETKPN TESRPVFSTF QSQTKAAGSN QDMFRRKIPI TSSSTPTALG LLLQSSLFRE  300
LVEKNAHVSE EESDGENKKD LPPVSSDDEY GGILYDLPGV QLQRDLHFDY DSTNIYGNNI  360
NMATIC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	35	RRRPICAVGGDIPEAVCIKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	4e-81	AP2 family protein