PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu027570.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 417aa MW: 46843.9 Da PI: 4.883

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu027570.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.3	4.3e-14	56	114	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d s+ n k+ k+++lg ++ +e Aa+ ++ a++k +g Oeu027570.1 56 IFRGVTRHRWTGRFEAHLWDKSIwNSiqnKKgKQIYLGAYDNEESAARTYDLAALKHWG 114 69****************777788876447*********************9887 PP
2	AP2	48.1	3e-15	157	208	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ + rW+A+I + +k+ +lg++ t eeAa+a++ a+ +++g Oeu027570.1 157 SKYRGVARHHHNDRWEARIGCaS----GNKYLYLGTYSTQEEAAAAYDMAAIEFRG 208 89**99*******9943....25**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MKRPPPPPPS YSSPPSSSSS SCISSPKTQK KSQSKRVRPK KIQNAADDSN KSRRSIFRGV 60 TRHRWTGRFE AHLWDKSIWN SIQNKKGKQI YLGAYDNEES AARTYDLAAL KHWGPGTPLN 120 FPLEMYLTEI EEMQKMTKEE YLASLRRQSN GFSRGVSKYR GVARHHHNDR WEARIGCASG 180 NKYLYLGTYS TQEEAAAAYD MAAIEFRGPN AVTNFDISKY TDKLKKFTPE VEVNQDDVQA 240 TNQETSELEF QVMDQETSKL IPQTLVDKTI DHQYQQQEEY NQMVQHSDSN LEMTDSIDSD 300 VMVMMDPTKD IEHCWDNLCF DLDLNSLQIP NIPLENNELL GLFDEKGFED DIGSIFDSSF 360 DENDFLQGTM PGTSVGSNGV EADILVSRGE KGLDASITSS SSPPPSTITS VGSNIV*

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MKRPPPPPPS YSSPPSSSSS SCISSPKTQK KSQSKRVRPK KIQNAADDSN KSRRSIFRGV  60
TRHRWTGRFE AHLWDKSIWN SIQNKKGKQI YLGAYDNEES AARTYDLAAL KHWGPGTPLN  120
FPLEMYLTEI EEMQKMTKEE YLASLRRQSN GFSRGVSKYR GVARHHHNDR WEARIGCASG  180
NKYLYLGTYS TQEEAAAAYD MAAIEFRGPN AVTNFDISKY TDKLKKFTPE VEVNQDDVQA  240
TNQETSELEF QVMDQETSKL IPQTLVDKTI DHQYQQQEEY NQMVQHSDSN LEMTDSIDSD  300
VMVMMDPTKD IEHCWDNLCF DLDLNSLQIP NIPLENNELL GLFDEKGFED DIGSIFDSSF  360
DENDFLQGTM PGTSVGSNGV EADILVSRGE KGLDASITSS SSPPPSTITS VGSNIV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	7e-97	AP2 family protein