PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu027341.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 180aa MW: 19820.2 Da PI: 7.992 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 108.9 | 2.4e-34 | 9 | 67 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCtsa C vkk+vers+edp+vv++tYeg H+h+ Oeu027341.1 9 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSAACGVKKRVERSSEDPSVVVTTYEGAHTHP 67 59********************************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MTKSEIDNLD DGYRWRKYGQ KAVKNSPFPR SYYRCTSAAC GVKKRVERSS EDPSVVVTTY 60 EGAHTHPCPI TPRGSFGIMP ENTTFGGVGI CSGGGSGGDG GSSFAIPQVI HYQNQQHQIQ 120 QQPYFHNLTP PLSFTNTNPL LPRPHQERPF YPSAAPLARD HGLLEDMLPS QILKETKED* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49520.1 | 7e-45 | WRKY family protein |