PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu027294.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 316aa    MW: 35407.1 Da    PI: 8.5455
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu027294.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72.1e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l++++  +G g+W++ +r  g+ R++k+c++rw +yl
      Oeu027294.1 14 RGLWSPEEDEKLKNYISTYGHGSWSSLPRFAGLQRCGKSCRLRWINYL 61
                     788*******************************************97 PP
2Myb_DNA-binding51.13.1e-1667109145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +g+++ eE el++++ + lG++ W+ Ia++++ gRt++++k++w+
      Oeu027294.1  67 KGNFSSEETELIIELQRILGNR-WAQIAKHLP-GRTDNEVKNFWN 109
                      79********************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGQHSCCNKQ KVKRGLWSPE EDEKLKNYIS TYGHGSWSSL PRFAGLQRCG KSCRLRWINY  60
LRPDLKKGNF SSEETELIIE LQRILGNRWA QIAKHLPGRT DNEVKNFWNS AIKKKHISQN  120
LFDQAPFSNL SSSNSNFPQY SEFNQVCIPT QPPSPVQGID FGEFKADQLS HSAIMLTRSP  180
SSAPACPLGY LPQFIDRQQQ ILRPEDYSIV SSDQYPFFAT NKLLDQNPST MLPVLPKVLE  240
SIAGSSNFPS ERLYANDMQA SSYDIEYIKP IMPACSTLSS SSMSQTSSSS SFSLSQLPCS  300
GTMFVNPSLP PRWVP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.21e-70MYB family protein