PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu027079.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 638aa MW: 69512.9 Da PI: 5.1689

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu027079.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26	1.6e-08	139	179	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +rRR+riN L+ l+P++ K + a++L +A++Y+k+ q Oeu027079.1 139 QRRRSRINGNTKSLQNLIPNS-----NKTNNASMLDEAIKYLKQHQ 179 7*****************7.....5**************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MPTKGQSNRC HGRCIRRAKK VESPHLFQVE ARRHQLTIHA AACVPSFILT LPLSAAGAFK 60 ERRRSKVHIC LKSKPAVINS PSTPLPRSPA VPDAIEALVE EALLKPTPRR NSSKITRATE 120 VYNLSQKVPR FEIMRCIWQR RRSRINGNTK SLQNLIPNSN KTNNASMLDE AIKYLKQHQL 180 QVELAIFPVS SMHVCLHTSS VITSETYLYV ALPNMFNLHP AARIPTPSEL STPTVESLFF 240 STVSVACVFQ HQPSVSTDVH RQSVDTDVWA FEAIPEIGEC FGQRVDERLP RILRWSARKQ 300 PQHRTYDAFF KNVQLHVYAT LRPTDAEAEQ PYLSSLVPYD DPPVPVLDDI ARNVVALQIH 360 SLHAESGVGG QSGGQDLEDR VRSGRSGDGE TSGDDESDGE SESDSEGDDG EDTGNSSSPA 420 GAPIRSPERG HTTNSQPVRT SDSSLTKGEV EELLLDQRIL FEMRLRTVKL EIEQHVTFEC 480 TKLREFITGQ VAPHPPTTAP RSTGAIFEPG PSSCSPQDVH GRGTDPLPTP IELGVDTGRS 540 QPPVGAYSPP CRDEGELLVE TEDLPEGADI APCPDAEHES LPTPMYDQED GAATEPSDAA 600 AVSDAEIDGC KVTDGEGVVA TVPVPAADVP ILAPVPE*

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MPTKGQSNRC HGRCIRRAKK VESPHLFQVE ARRHQLTIHA AACVPSFILT LPLSAAGAFK  60
ERRRSKVHIC LKSKPAVINS PSTPLPRSPA VPDAIEALVE EALLKPTPRR NSSKITRATE  120
VYNLSQKVPR FEIMRCIWQR RRSRINGNTK SLQNLIPNSN KTNNASMLDE AIKYLKQHQL  180
QVELAIFPVS SMHVCLHTSS VITSETYLYV ALPNMFNLHP AARIPTPSEL STPTVESLFF  240
STVSVACVFQ HQPSVSTDVH RQSVDTDVWA FEAIPEIGEC FGQRVDERLP RILRWSARKQ  300
PQHRTYDAFF KNVQLHVYAT LRPTDAEAEQ PYLSSLVPYD DPPVPVLDDI ARNVVALQIH  360
SLHAESGVGG QSGGQDLEDR VRSGRSGDGE TSGDDESDGE SESDSEGDDG EDTGNSSSPA  420
GAPIRSPERG HTTNSQPVRT SDSSLTKGEV EELLLDQRIL FEMRLRTVKL EIEQHVTFEC  480
TKLREFITGQ VAPHPPTTAP RSTGAIFEPG PSSCSPQDVH GRGTDPLPTP IELGVDTGRS  540
QPPVGAYSPP CRDEGELLVE TEDLPEGADI APCPDAEHES LPTPMYDQED GAATEPSDAA  600
AVSDAEIDGC KVTDGEGVVA TVPVPAADVP ILAPVPE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	1e-16	bHLH family protein